LOCUS BC017199 1497 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens paired-like homeobox 2b, mRNA (cDNA clone MGC:1678 IMAGE:3161284), complete cds. ACCESSION BC017199 VERSION BC017199.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1497) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1497) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC017199.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 4 Row: n Column: 18 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 12707579. FEATURES Location/Qualifiers source 1..1497 /db_xref="H-InvDB:HIT000037869" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:1678 IMAGE:3161284" /tissue_type="Brain, neuroblastoma" /clone_lib="NIH_MGC_19" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1497 /gene="PHOX2B" /gene_synonym="NBPhox" /db_xref="GeneID:8929" /db_xref="HGNC:HGNC:9143" /db_xref="MIM:603851" CDS 97..1041 /gene="PHOX2B" /gene_synonym="NBPhox" /codon_start=1 /product="paired-like homeobox 2b" /protein_id="AAH17199.1" /db_xref="GeneID:8929" /db_xref="HGNC:HGNC:9143" /db_xref="MIM:603851" /translation="MYKMEYSYLNSSAYESCMAGMDTSSLASAYADFSSCSQASGFQY NPIRTTFGATSGCPSLTPGSCSLGTLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIR TTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKQERAA AAAAAAAKNGSSGKKSDSSRDDESKEAKSTDPDSTGGPGPNPNPTPSCGANGGGGGGP SPAGAPGAAGPGGPGGEPGKGGAAAAAAAAAAAAAAAAAAAAGGLAAAGGPGQGWAPG PGPITSIPDSLGGPFASVLSSLQRPNGAKAALVKSSMF" BASE COUNT 299 a 482 c 462 g 254 t ORIGIN 1 cgttgagctg tgcacatctc cccactccag ccaccttctc catatccatc ttttatttca 61 tttttccact tggctgagcc atccagaacc ttttcaatgt ataaaatgga atattcttac 121 ctcaattcct ctgcctacga gtcctgtatg gctgggatgg acacctcgag cctggcttca 181 gcctatgctg acttcagttc ctgcagccag gccagtggct tccagtataa cccgataagg 241 accacttttg gggccacgtc cggctgccct tccctcacgc cgggatcctg cagcctgggc 301 accctcaggg accaccagag cagtccgtac gccgcagttc cttacaaact cttcacggac 361 cacggcggcc tcaacgagaa gcgcaagcag cggcgcatcc gcaccacttt caccagtgcc 421 cagctcaaag agctggaaag ggtcttcgcg gagactcact accccgacat ctacactcgg 481 gaggagctgg ccctgaagat cgacctcaca gaggcgcgag tccaggtgtg gttccagaac 541 cgccgcgcca agtttcgcaa gcaggagcgc gcagcggcag ccgcagcggc cgcggccaag 601 aacggctcct cgggcaaaaa gtctgactct tccagggacg acgagagcaa agaggccaag 661 agcactgacc cggacagcac tgggggccca ggtcccaatc ccaaccccac ccccagctgc 721 ggggcgaatg gaggcggcgg cggcgggccc agcccggctg gagctccggg ggcggcgggg 781 cccgggggcc cgggaggcga acccggcaag ggcggcgcag cagcagcggc ggcggccgcg 841 gcagcggcgg cggcggcagc ggcagcggcg gcagctggag gcctggctgc ggctgggggc 901 cctggacaag gctgggctcc cggccccggc cccatcacct ccatcccgga ttcgcttggg 961 ggtcccttcg ccagcgtcct atcttcgctc caaagaccca acggtgccaa agccgcctta 1021 gtgaagagca gtatgttctg atctggaatc ctgcggcggc ggcggcggcg gcgacagcgg 1081 gcgagccagg gcccgggcgg gcgagtgggc gagcgggtag gcccaaggct attgtcgtcg 1141 ctgctgccat ggctttttca ttgagggcct aaagtaatcg cgctaagaat aaagggaaaa 1201 cggcgtcgcc ctcatttcaa ccccactcct acccccttcc tcaaccccca aacaaaacaa 1261 acaaacttcc ctggcttcgc acctgcctgg ggcctcgcag cggggccagg gctccgcctg 1321 ctgatcgggg gttgtgagca gcgcggcctg gacgcggggc actctcaggg ggctgtgtct 1381 gcgtgtcagt ttgtgtctgt ctcggggaat gtgtgtctgt ggcccaagca ggtgacagga 1441 agagatgggg ggcctcaacc aacttagtga cttgtttaga aaaaaaaaaa aaaaaaa //