LOCUS BC017186 1806 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens coiled-coil domain containing 92, mRNA (cDNA clone
MGC:2943 IMAGE:3051346), complete cds.
ACCESSION BC017186
VERSION BC017186.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1806)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1806)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC017186.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 4 Row: g Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13376724.
FEATURES Location/Qualifiers
source 1..1806
/db_xref="H-InvDB:HIT000037858"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2943 IMAGE:3051346"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1806
/gene="CCDC92"
/gene_synonym="FLJ22471"
/db_xref="GeneID:80212"
/db_xref="HGNC:HGNC:29563"
CDS 140..1135
/gene="CCDC92"
/gene_synonym="FLJ22471"
/codon_start=1
/product="coiled-coil domain containing 92"
/protein_id="AAH17186.1"
/db_xref="GeneID:80212"
/db_xref="HGNC:HGNC:29563"
/translation="MTSPHFSSYDEGPLDVSMAATNLENQLHSAQKNLLFLQREHAST
LKGLHSEIRRLQQHCTDLTYELTVKSSEQTGDGTSKSSELKKRCEELEAQLKVKENEN
AELLKELEQKNAMITVLENTIKEREKKYLEELKAKSHKLTLLSSELEQRASTIAYLTS
QLHAAKKKLMSSSGTSDASPSGSPVLASYKPAPPKDKLPETPRRRMKKSLSAPLHPEF
EEVYRFGAESRKLLLREPVDAMPDPTPFLLARESAEVHLIKERPLVIPPIASDRSGEQ
HSPAREKPHKAHVGVAHRIHHATPPQAQPEVKTLAVDQVNGGKVVRKHSGTDRTV"
BASE COUNT 470 a 568 c 441 g 327 t
ORIGIN
1 cgggccccca ccgccgcccg ccgggaggac cgagcctaag agggcagccg cctgaaggaa
61 cgcgacggcg gcgcccgcag tatttttcag tgctgtacaa gcgtcttgaa ttactctggt
121 agcttttcca gaaagaccca tgacttcacc acatttctcg agttacgatg aaggtcctct
181 ggatgtcagc atggcagcca caaacctgga gaaccagctg cacagcgcac agaagaacct
241 cctgttcctt cagcgggagc atgccagcac gctcaagggg ctgcactccg agatcaggcg
301 gctgcagcag cactgcacag atttaacata tgagctgaca gtcaaaagtt cggaacagac
361 aggagacggg acttctaaaa gcagtgaatt aaagaaaaga tgtgaagagc tggaagccca
421 actgaaagtg aaagagaacg aaaatgctga gttgttgaaa gaactggagc agaaaaacgc
481 gatgatcaca gtgctggaga acaccatcaa ggagcgagag aagaagtacc tggaggagct
541 gaaggccaag agtcacaagc tgaccctgct gtctagcgag ctggagcagc gggccagcac
601 catcgcctac ctgacctccc agctgcacgc cgccaagaag aagctcatga gctccagcgg
661 gacctcagat gccagcccgt cagggagccc cgtgctggcc agctacaagc cagcgccccc
721 caaagacaag ctacccgaaa cgcctcgccg ccgcatgaaa aagagcctct cagccccctt
781 gcacccggaa tttgaagagg tctacagatt cggggcagag agcaggaaac tccttttgcg
841 ggaaccagtg gatgctatgc ccgaccccac cccatttctg ctggctaggg agtccgccga
901 ggtccacctc atcaaagaga ggcccctcgt catccccccc atcgcctccg accgaagcgg
961 cgagcagcac agcccggccc gcgaaaagcc gcacaaggcc cacgtcgggg tggcacatcg
1021 gatccaccac gccaccccgc cgcaggccca gcccgaggtg aagaccctgg cggtcgacca
1081 ggtgaacgga ggcaaggtgg tgaggaagca ctcagggacg gacagaactg tgtgaagccc
1141 gccgtgcccc accccgcgct gtccatgcac tgtgagcacc actgggaaat ctcagccaca
1201 ccttttctgt ttaatcccat gcatgccaaa cacttttcac acctaccgac ccattctcct
1261 tctgcttctc ttgccctctt cttcacacca aaatatgatc gtgtccctgc cgcagaatat
1321 gtatttccta attgctgtgg ccaaacgcct gtgtgccgaa tcgcttgctt ctgatcccgc
1381 tccgtgtaac ctaagtgcgc tgcaggcaaa gcccaggcca cggctgcgtc actactgatg
1441 ttcacgatgc cacacagtca cacacctaat tcattctcaa gtcggagcaa cacataccaa
1501 ccttgacctt atcctcaagc tccagggcag cctggccgag cagcccctgc tccctcctgg
1561 agacccttgt cacctcccga gctcctcctg gagacccctg tcacctcctg accaaccttt
1621 cccagggcgg caccgatcac cgagcagccg tgcgtgtatc tcaaggaact aaataagatg
1681 acgctactcc tcatagcacc acaacctgaa tgtgtgttca tatttttttg ttagttttat
1741 ccaaaatgtt taagatccca acaaacttta ttttctaaac ctgcaaaaaa aaaaaaaaaa
1801 aaaaaa
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