LOCUS BC017116 968 bp mRNA linear HUM 30-SEP-2003
DEFINITION Homo sapiens proteasome (prosome, macropain) subunit, beta type, 7,
mRNA (cDNA clone IMAGE:3912276), partial cds.
ACCESSION BC017116
VERSION BC017116.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 968)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 968)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC017116.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 15 Row: j Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 17981697.
FEATURES Location/Qualifiers
source 1..968
/db_xref="H-InvDB:HIT000089195"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3912276"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..968
/gene="PSMB7"
/gene_synonym="Z"
/db_xref="GeneID:5695"
/db_xref="MIM:604030"
CDS <1..773
/gene="PSMB7"
/gene_synonym="Z"
/codon_start=3
/product="PSMB7 protein"
/protein_id="AAH17116.2"
/db_xref="GeneID:5695"
/db_xref="MIM:604030"
/translation="NAVLEADFAKRGYKLPKARKTGTTIAGVVYKDGIVLGADTRATE
GMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTAN
RMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVF
EDKFRPDMEEEEAKNLVSEAIAAGIFNDLGSGSNIDLCVISKNKLDFLRPYTVPNKKG
TRLGRYRCEKGTTAVLTEKITPLEIEVLEETVQTMDTS"
misc_feature 39..647
/gene="PSMB7"
/gene_synonym="Z"
/note="PRE1; Region: 20S proteasome, alpha and beta
subunits [Posttranslational modification, protein
turnover, chaperones]"
/db_xref="CDD:COG0638"
BASE COUNT 315 a 208 c 238 g 207 t
ORIGIN
1 ggaatgccgt cttggaagcc gattttgcaa agaggggata caagcttcca aaggcccgga
61 aaactggcac gaccatcgct ggggtggtct ataaggatgg catagttctt ggagcagata
121 caagagcaac tgaagggatg gttgttgctg acaagaactg ttcaaaaata cacttcatat
181 ctcctaatat ttattgttgt ggtgctggga cagctgcaga cacagacatg acaacccagc
241 tcatttcttc caacctggag ctccactccc tctccactgg ccgtcttccc agagttgtga
301 cagccaatcg gatgctgaag cagatgcttt tcaggtatca aggttacatt ggtgcagccc
361 tagttttagg gggagtagat gttactggac ctcacctcta cagcatctat cctcatggat
421 caactgataa gttgccttat gtcaccatgg gttctggctc cttggcagca atggctgtat
481 ttgaagataa gtttaggcca gacatggagg aggaggaagc caagaatctg gtgagcgaag
541 ccatcgcagc tggcatcttc aacgacctgg gctccggaag caacattgac ctctgcgtca
601 tcagcaagaa caagctggat tttctccgcc catacacagt gcccaacaag aaggggacca
661 ggcttggccg gtacaggtgt gagaaaggga ctactgcagt cctcactgag aaaatcactc
721 ctctggagat tgaggtgctg gaagaaacag tccaaacaat ggacacttcc tgaatggcat
781 cagtgggtgg ctggccgcgg ttctggaagg tggtgagcat tgaggcccag taagacactc
841 atgtggctag tgtttgccga atgaaactca actcaataaa aaacaaaaac caaattggga
901 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
961 aaaaaaaa
//