LOCUS BC017102 2446 bp mRNA linear HUM 26-APR-2005
DEFINITION Homo sapiens serum response factor binding protein 1, mRNA (cDNA
clone IMAGE:3357181), partial cds.
ACCESSION BC017102
VERSION BC017102.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2446)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2446)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 23 Row: a Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..2446
/db_xref="H-InvDB:HIT000089188"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3357181"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2446
/gene="SRFBP1"
/gene_synonym="FLJ25286"
/gene_synonym="P49"
/gene_synonym="p49/STRAP"
/gene_synonym="STRAP"
/db_xref="GeneID:153443"
CDS <1..945
/gene="SRFBP1"
/gene_synonym="FLJ25286"
/gene_synonym="P49"
/gene_synonym="p49/STRAP"
/gene_synonym="STRAP"
/codon_start=1
/product="SRFBP1 protein"
/protein_id="AAH17102.1"
/db_xref="GeneID:153443"
/translation="LKAAVQAFKEARQNVAEVESSKNASEDNHSENTLYSNDNGSNLQ
REATVISEQKVKETKILAKKPIHNSKEKIAKMEHGPKAVTIANSPSKPSEKDSVVSLE
SQKTPADPKLKTLSQTKKNKGSDSSLSGNSDGGEEFCEEEKEYFDDSTEERFYKQSSM
SEDSDSGDDFFIGKVRRTRKKESSCHSSVKEQKPLEKVFLKEDTGETHGDTRNDKIKP
STETRKLESVFFHSLSGSKSSRRNFKEQAPKTRSLDFPQNEPQIKNQFNKKLSGRLEN
TKQQLQLPLHPSWEASRRRKEQQSNIAVFQGKKITFDD"
BASE COUNT 849 a 426 c 458 g 713 t
ORIGIN
1 ctaaaagctg ctgtacaagc ctttaaagaa gcaagacaaa atgttgctga agttgagtca
61 tcaaagaatg cttcagagga caatcattct gagaatactt tgtattcaaa tgataatgga
121 agtaatttac agcgtgaagc aactgtcatc agtgagcaaa aagtcaaaga aaccaaaata
181 ttggcgaaga aaccaataca taattcaaag gaaaaaatag caaagatgga acatggacct
241 aaagcagtga ctattgcaaa ttctccatca aagccttcag aaaaggattc tgtagtttcc
301 cttgagtccc agaagacacc tgctgaccca aaactgaaaa ctctaagtca aaccaaaaaa
361 aacaaaggat ctgatagctc actctctggt aacagtgatg gcggagaaga attttgtgaa
421 gaggagaagg aatattttga tgatagcaca gaagaaaggt tttacaagca gtcttccatg
481 tctgaagata gtgatagcgg tgacgacttc ttcattggga aagtcagacg gacacgaaag
541 aaggaaagta gttgtcattc ttcagttaag gaacaaaaac cactagaaaa agtgtttctt
601 aaagaagata caggtgaaac tcatggggat acaagaaatg acaaaatcaa gccaagtaca
661 gaaaccagaa agttagaatc agtgtttttc cactctttat ctggatctaa aagctctaga
721 agaaatttca aagaacaggc tccaaaaaca agatccctag attttccaca gaatgagcct
781 cagatcaaga atcagtttaa taagaagcta tcaggaagac ttgaaaatac aaaacagcaa
841 ttgcagctgc ctcttcatcc ttcatgggaa gcaagcagaa ggcgaaaaga acagcaatct
901 aatattgctg tgtttcaggg gaaaaaaatt acgtttgatg attgattagt gcctctttct
961 gcaaactttt ccatctaaaa aaaaaaatgt tttttttggg acaggatctc attctgttgc
1021 ccagactaga gtacaatatt gcaatcacag ctcactgcag cctcaaactc ctgggctcaa
1081 gtgatcctcc cacctctgcc tcccaaaggg ctgggactgc aggtgcatgc actaccatgc
1141 ccagctttct caccccaggc tctgcagcta ttacttaaac tcgtatttga ataagtctct
1201 tggggagaat tatagaatgt ttgtttttgt attttttttt aaagtaaatt caacttacgc
1261 ttatataagc ctttcacaaa tccaatatgt acttaaattg atttttaata atatccctca
1321 gactgtttcc cttatgaagt aatttgggga ttttagtgat ctcatatttt ctctttagtg
1381 cttatcatga aatgtgcttc actggttcag ctctgttgtt tccttaaaca taaatgtcaa
1441 tatatattta aaataataat ggaaacatag gaaatcagct atttaaacca gatcaccctt
1501 gttaaaaatc attcttgtta gcaaactaaa atagtaactt ttattatgga tgtacagata
1561 aatattaatt ttattatagt tttaagtact tgtgatcatg tactttttga ttctaaaata
1621 gttgtctagg acaattttgg gattcttaat tatattttag ttaagaaaat tgtttaaata
1681 tagcaataca accaataatt tgttttatgt ttcactgcat ataaatattt ccattaaatc
1741 aagaatgtat attatctagt ttttactata cttattttaa aatttttgag gaatcataga
1801 ttctaatttt taagaacaaa ttctgaaggt ggtaggatta aaagaatatt tccactgatg
1861 gctaagcaaa gaagttgtaa gatgactcac tgaggaaggg actgctttat acatcacagt
1921 actgctattt aaaaggaaaa cagaaatttt taaatccctt caaatgtttc acttttgcta
1981 tgctgggaaa aattttgaag ttcttggtaa actgaataat gctaatccat gtttcctgca
2041 cattagttcc tttaatggca gggaaggcca tctggttaac ctgtattcac aaactctcaa
2101 gagtttctac ttatttcagg agcttaagaa tttagataac tcagccgggc gtggtgactc
2161 atgcctataa tcccagcact ttgggaggct gaggcgggta gatcgctaga ggcaaggagt
2221 tcaaaaccag cctgggcaac atggtgaaac cctgtctcta ctaaaaatac agaaaattat
2281 ccaggcgtgg tggccggcat ctgtaattcc agctactcag aaggctgagg cataagaatt
2341 gcttgaacct gggaggtgga ggttgcagtg agccaagatt gcaccactgc actccagcct
2401 gggtgacaga gtatgactgt ctcaaaaaaa aaaaaaaaaa aaaaaa
//