LOCUS BC017098 1954 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens poly(rC) binding protein 4, mRNA (cDNA clone MGC:14975
IMAGE:3508303), complete cds.
ACCESSION BC017098
VERSION BC017098.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1954)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1954)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 23 Row: e Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14670372.
FEATURES Location/Qualifiers
source 1..1954
/db_xref="H-InvDB:HIT000037837"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14975 IMAGE:3508303"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1954
/gene="PCBP4"
/gene_synonym="LIP4"
/gene_synonym="MCG10"
/db_xref="GeneID:57060"
/db_xref="HGNC:HGNC:8652"
/db_xref="MIM:608503"
CDS 252..1334
/gene="PCBP4"
/gene_synonym="LIP4"
/gene_synonym="MCG10"
/codon_start=1
/product="PCBP4 protein"
/protein_id="AAH17098.1"
/db_xref="GeneID:57060"
/db_xref="HGNC:HGNC:8652"
/db_xref="MIM:608503"
/translation="MSGSDGGLEEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIR
EQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPV
TLRLVIPASQCGSLIGKAGTKIKEIRESPPKGATIPYHPSLSLGTVLLSANQGFSVQG
QYGAVTPAEVTKLQQLSSHAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQG
SKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGT
PSSAPADLPAPFSPPLTALPTAPPGLLGTPYAISLSNFIGLKPMPFLALPPASPGPPP
GLAAYTAKMAAANGSKKAERQKFSPY"
BASE COUNT 387 a 643 c 565 g 359 t
ORIGIN
1 gtcactcgca gttgtgagcg gccgcctctc ccggggacaa tgtgggactg agcggcccag
61 ccgccgtgcc gccgccgccg ccgccgcagg acagccccag cgagcctctg gagtccctgt
121 ggcagaactc aaatggaagg aggagcagct gcacccaggg gagcagggtg tcacctccgt
181 tggatagagc cggccaggtt gcagcgcgga cacactcgca ggtcgctgtg gccccagcct
241 cgcctgacag aatgagcggc tcggacgggg gactggagga ggagccagag ctcagcatca
301 ccctcacgct gcggatgctg atgcacggga aggaagtggg cagcatcatc gggaagaagg
361 gcgagactgt aaagcgaatc cgggagcaga gcagtgcccg gatcaccatc tccgagggct
421 cctgccctga acgcatcacc accatcaccg ggtctacagc agctgtcttc catgcagtct
481 ccatgattgc tttcaaactg gatgaggacc tttgtgctgc tcctgcaaat ggtggaaatg
541 tctccaggcc tccagtgacc ctgcgccttg tcatccctgc cagtcagtgt ggctcactga
601 ttgggaaggc tggcaccaag atcaaggaga tccgagagtc cccacccaaa ggagccacta
661 tcccctacca tccgagcctc tccctaggta ctgttcttct ctctgccaac cagggcttct
721 ctgtccaggg tcagtatggg gctgtgaccc cagctgaggt caccaagctc cagcagctct
781 caagccatgc ggtccccttt gccacaccca gcgtggtgcc aggactggat cccggcacac
841 agaccagctc acaggagttc ttggttccca acgatttgat tggctgtgtg atcgggcgcc
901 agggcagcaa gatcagcgag atccggcaga tgtcaggggc acatatcaag atcgggaacc
961 aagcagaggg cgctggggag cggcatgtca ccatcactgg ctctccggtc tccatcgccc
1021 tggcccagta cctcatcact gcctgtctag agacggccaa gtctacctct ggggggacgc
1081 ccagctcggc ccccgcagac ctgcctgccc ccttctcgcc acccctgacg gccctgccca
1141 cagctccccc tggcctgctg ggcacaccct atgccatctc cctctccaac ttcatcggcc
1201 tcaagcccat gcccttcttg gctttaccac ctgcttcccc agggccgccg ccgggcttgg
1261 cggcctacac tgccaagatg gcagcagcta atgggagcaa gaaggctgag cggcagaaat
1321 tctcccccta ctgaggccag ctgaggtaca ggcaggggca ggcaggacca ccagcagggg
1381 gctgcctctg caccctaccc gcccaaggag actccaccct ggggtcccaa acgccgctaa
1441 cgcccagacg catggatgca ccccctaccc tgcctccatc tatgggagtt ctttctctca
1501 gagtgggggc agtttctggc ccaggggtct gagctgcggc agccccaggg cagggggccc
1561 tacctcctca gctctgtgct tggatacagg gagcagccag gagactccct agtgccccca
1621 ccatggcggg tgtcactcac gcactcccca tcccttaggg cttcctggcc tactgcatcc
1681 ttgtgggagt cagggaggag ggcccgttgg gtagctgggg ccaggcttct ctccccacca
1741 cctgcagatt tcttgctgct tccactgata cccttttgac tggaatgaac tggctgggct
1801 tgtcaggggg caccccaaag agggggcact gccaggtagc tgggggagtg gcatggggca
1861 ggggcccagt tctcagcagc agacactctg tacagttttt tcaatccctg tttttgaata
1921 aatattctca gcgaccaaaa aaaaaaaaaa aaaa
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