LOCUS BC017092 1548 bp mRNA linear HUM 06-JUL-2004
DEFINITION Homo sapiens RAB7B, member RAS oncogene family, mRNA (cDNA clone
MGC:9726 IMAGE:3851998), complete cds.
ACCESSION BC017092
VERSION BC017092.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1548)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1548)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 20 Row: n Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, Similarity but not identity to protein.
FEATURES Location/Qualifiers
source 1..1548
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9726 IMAGE:3851998"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_65"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1548
/gene="RAB7B"
/gene_synonym="MGC16212"
/gene_synonym="MGC9726"
/gene_synonym="RAB7"
/db_xref="GeneID:338382"
CDS 173..772
/gene="RAB7B"
/gene_synonym="MGC16212"
/gene_synonym="MGC9726"
/gene_synonym="RAB7"
/codon_start=1
/product="RAB7B protein"
/protein_id="AAH17092.1"
/db_xref="GeneID:338382"
/translation="MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGAS
ILSKIIILGDTTLKLQIWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIW
RGDVLAKIVPMEQSYPMVLLGNKIDLADRKVPQEVAQGWCREKDIPYFEVSAKNDINV
VQAFEMLASRALSRYQSILENHLTESIKLSPDQSRSRCC"
BASE COUNT 364 a 460 c 400 g 324 t
ORIGIN
1 gtggcgtggc ttcaacagac tttcttttgc ctgtctttgt cccagagcct cttccctggc
61 cctgctgaga ccactgctct aagaagagac caccagactg agagaggact cccagctgcc
121 ctcagagcgg aggccgagtg ctgcacagcc acagctgctc tgaagccctt ccatgaatcc
181 ccggaagaag gtggacctga aactcattat cgtcggagcc attggtgtgg gaaagacctc
241 cctccttcac caatatgtgc acaagacgtt ttatgaggaa taccagacca cactgggggc
301 cagcatcctc tccaagatta tcatattggg tgacacaact ttgaagttac agatctggga
361 cacgggcggt caggagcggt tccgctccat ggtgtccacg ttctacaagg gctccgatgg
421 ctgcatccta gcttttgatg tcaccgacct ggagtctttt gaagccctgg atatctggcg
481 gggtgatgtc ctggccaaga ttgtccccat ggagcagtcc taccccatgg tgttgttggg
541 gaacaagatc gatctggcag accggaaggt accccaggaa gtagctcaag gctggtgtag
601 agagaaagat attccttact ttgaagtcag tgccaagaat gacatcaatg tggtgcaagc
661 gtttgagatg ctggccagta gggctctgtc gaggtaccag agcatcttag aaaatcacct
721 cacagaatcc atcaagctct cgccagacca gtcaaggagc agatgctgct gacctccaga
781 cgcctgctct ggaagcccag aaacagagcc tgccccgagc ctggtcaccc caggcttgag
841 aacaggtgac catccccctc cagccccact gcctgcccaa gcacagtgca gggggcctaa
901 gctctgcggc agagcccttg accctggtgc tgggcccaga gtcagagggc agcccctggc
961 tcaggctgag tatagtgaga gcgtctggat gaagcccgga atgtcagagc caaaccctgg
1021 tcctgcagaa gtcacagttt ccgcagtggc tccagctttc cccacccatc cacccctcaa
1081 acactcccgc tccagaacac acatctccgc agaccggcca ctgattggag tctggttaca
1141 tcctcctgtg gacagacctt cctcacccgc tcccacctca cacccctcag ccacaagcaa
1201 agctttggac aatggcacag ctcagcctcc ttcaacgagc agactaagga gtaaaggtct
1261 ggaccccaca tgctgggccc gcctcagctc ctggcagaag ctgtcgtgcc tgagaccccc
1321 tctgctccct ccagggtaga agactgaggg agcacaggag aagccacaag ggaccatggc
1381 tcattcctcc ttgctgggtg ctcaggcaac tcacataaat ctctgagtct caatttgttt
1441 atctgtcctg tgggggtgag atgtgccttg ccccctgtat cacagtgtgg ttttgaggac
1501 cagaagctgt gcttaaatcc agtagctgtt gtcaaaaaaa aaaaaaaa
//