LOCUS BC017079 1110 bp mRNA linear HUM 04-JUN-2004
DEFINITION Homo sapiens SET and MYND domain containing 3, mRNA (cDNA clone
IMAGE:3848080), partial cds.
ACCESSION BC017079
VERSION BC017079.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1110)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1110)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 20 Row: j Column: 16.
FEATURES Location/Qualifiers
source 1..1110
/db_xref="H-InvDB:HIT000037826"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3848080"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_65"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1110
/gene="SMYD3"
/gene_synonym="FLJ21080"
/gene_synonym="ZMYND1"
/gene_synonym="ZNFN3A1"
/db_xref="GeneID:64754"
CDS <1..864
/gene="SMYD3"
/gene_synonym="FLJ21080"
/gene_synonym="ZMYND1"
/gene_synonym="ZNFN3A1"
/codon_start=1
/product="SMYD3 protein"
/protein_id="AAH17079.2"
/db_xref="GeneID:64754"
/translation="EGLRQLVMTFQHFMREEIQDASQLPPAFDLFEAFAKVICNSFTI
CNAEMQEVGVGLYPSISLLNHSCDPNCSIVFNGPHLLLRAVRDIEVGEELTICYLDML
MTSEERRKQLRDQYCFECDCFRCQTQDKDADMLTGDEQVWKEVQESLKKIEELKAHWK
WEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYR
IFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILL
LEECDANIRAS"
BASE COUNT 330 a 235 c 271 g 274 t
ORIGIN
1 gagggcctca ggcaactcgt aatgacattt caacatttca tgagagaaga aatacaggat
61 gcctctcagc tgccacctgc ctttgacctt tttgaagcct ttgcaaaagt gatctgcaac
121 tctttcacca tctgtaatgc ggagatgcag gaagttggtg ttggcctata tcccagtatc
181 tctttgctca atcacagctg tgaccccaac tgttcgattg tgttcaatgg gccccacctc
241 ttactgcgag cagtccgaga catcgaggtg ggagaggagc tcaccatctg ctacctggat
301 atgctgatga ccagtgagga gcgccggaag cagctgaggg accagtactg ctttgaatgt
361 gactgtttcc gttgccaaac ccaggacaag gatgctgata tgctaactgg tgatgagcaa
421 gtatggaagg aagttcaaga atccctgaaa aaaattgaag aactgaaggc acactggaag
481 tgggagcagg ttctggccat gtgccaggca atcataagca gcaattctga acggcttccc
541 gatatcaaca tctaccagct gaaggtgctc gactgcgcca tggatgcctg catcaacctc
601 ggcctgttgg aggaagcctt gttctatggt actcggacca tggagccata caggattttt
661 ttcccaggaa gccatcccgt cagaggggtt caagtgatga aagttggcaa actgcagcta
721 catcaaggca tgtttcccca agcaatgaag aatctgagac tggcttttga tattatgaga
781 gtgacacatg gcagagaaca cagcctgatt gaagatttga ttctactttt agaagaatgc
841 gacgccaaca tcagagcatc ctaagggaac gcagtcagag ggaaatacag cgtgtgtctt
901 tgttgaatgc cttattgagg tcacacactc tatgctttgt tagctgtgtg aacctctcct
961 attggaaatt ctgttccgtg tttgtgtagg taaataaagg cagacatggt ttgcaaacca
1021 caagaatcat tagttgtaga gaagcacgat tataataaat tcaaaacatt tggttgagga
1081 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//