LOCUS BC017076 1853 bp mRNA linear HUM 05-NOV-2003
DEFINITION Homo sapiens pecanex homolog (Drosophila), mRNA (cDNA clone
IMAGE:3846480), partial cds.
ACCESSION BC017076
VERSION BC017076.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1853)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1853)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC017076.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 20 Row: g Column: 18.
FEATURES Location/Qualifiers
source 1..1853
/db_xref="H-InvDB:HIT000089178"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3846480"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_65"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1853
/gene="PCNX"
/gene_synonym="KIAA0805"
/gene_synonym="KIAA0995"
/db_xref="GeneID:22990"
CDS <1..1622
/gene="PCNX"
/gene_synonym="KIAA0805"
/gene_synonym="KIAA0995"
/codon_start=3
/product="PCNX protein"
/protein_id="AAH17076.2"
/db_xref="GeneID:22990"
/translation="ALGTASHHMSSNLESFLYGLHALFKGDFRISSIRDEWIFADMEL
LRKVVVPGIRMSIKLHQDHFTSPDEYDDPTVLYEAIVSHEKNLVIAHEGDPAWRSAVL
ANSPSLLALRHVMDDGTNEYKIIMLNRRYLSFRVIKVNKECVRGLWAGQQQELVFLRN
RNPERGSIQNAKQALRNMINSSCDQPIGYPIFVSPLTTSYSDSHEQLKDILGGPISLG
NIRNFIVSTWHRLRKGCGAGCNSGGNIEDSDTGGGTSCTGNNATTANNPHSNVTQGSI
GNPGQGSGTGLHPPVTSYPPTLGTSHSSHSVQSGLVRQSPARASVASQSSYCYSSRHS
SLRMSTTGFVPCRRSSTSQISLRNLPSSIQSRLSMVNQMEPSGQSGLACVQHGLPSSS
SSSQSIPACKHHTLVGFLATEGGQSSATDAQPGNTLSPANNSHSRKAEVIYRVQIVDP
SQILEGINLSKRKELQWPDEGIRLKAGRNSWKDWSPQEGMEGHVIHRWVPCSRDPGTR
SHIDKAVLLVQIDDKYVTVIETGVLELGAEV"
misc_feature 3..623
/gene="PCNX"
/gene_synonym="KIAA0805"
/gene_synonym="KIAA0995"
/note="Pecanex_C; Region: Pecanex protein (C-terminus).
This family consists of C terminal region of the pecanex
protein homologues. The pecanex protein is a
maternal-effect neurogenic gene found in Drosophila"
/db_xref="CDD:pfam05041"
BASE COUNT 513 a 460 c 430 g 450 t
ORIGIN
1 gagctttggg gactgcatcc catcatatgt ccagtaattt agagtcattc ctctatggat
61 tgcatgccct atttaaagga gatttccgta tttcttcaat tcgagatgaa tggatctttg
121 ctgacatgga attgctaaga aaagtagtag tccctgggat ccgtatgtcc attaaacttc
181 atcaggatca ttttacttct ccagatgaat atgatgaccc tactgtgctc tatgaagcca
241 tagtatctca tgagaagaac ctcgtaatag cccatgaagg ggaccctgca tggcggagtg
301 cagtacttgc caactctccc tccttgcttg ctctgcggca tgtcatggat gatggcacca
361 atgaatataa aatcatcatg ctcaacagac gctacctgag cttcagggtc attaaagtga
421 ataaggaatg tgtccgaggt ctttgggcag ggcaacagca ggagcttgtt tttctacgta
481 accgtaaccc agagagaggt agcatccaaa atgcaaagca agccctgaga aacatgataa
541 actcatcttg tgatcaacct attggctacc caatctttgt ctcacccctg acaacttctt
601 actctgacag ccacgaacag cttaaagaca ttcttggggg tcctatcagc ttgggaaata
661 tcaggaactt catagtgtca acctggcaca ggcttaggaa aggttgcgga gctggatgta
721 acagtggtgg caatattgaa gattctgata ctggaggtgg gacttcctgc actggtaaca
781 atgcaacaac tgccaacaat ccccacagca acgtgaccca gggaagcatt ggaaatcctg
841 ggcagggatc aggaactgga ctccacccac ctgtcacatc ttatcctcca acactaggca
901 ctagccacag ctctcactct gtgcagtcgg gcctggtcag acagtctcct gcccgggcct
961 cagtagccag ccagtcttcc tactgctata gcagccggca ttcatccctc cggatgtcca
1021 ccactgggtt tgtgccttgt cggcgctctt ctactagtca gatatcgctt cgaaacttgc
1081 catcatccat ccaatcccga ctgtcgatgg tgaaccaaat ggaaccctca ggtcagagcg
1141 gcctggcctg tgtgcagcac ggcctgcctt cctccagcag ctccagccaa agcatcccag
1201 cctgcaaaca tcacactctc gtgggctttc ttgcgacaga gggaggtcag agcagtgcca
1261 ctgatgcaca gccaggcaac accttaagtc ctgccaacaa ttcacactcc agaaaggcag
1321 aagtgattta cagagtccaa attgtggatc ccagtcaaat tctggaaggg atcaacctgt
1381 ctaaaaggaa agagctacag tggcctgatg aaggaatccg gttaaaagct gggagaaata
1441 gctggaaaga ctggagtccg caggagggca tggaaggcca tgtgattcac cgatgggtgc
1501 cttgcagcag agatccaggt accagatccc acatcgacaa ggcagtgctt ctggtccaga
1561 ttgatgataa atatgtgact gtaattgaaa ctggggtact agaacttggg gctgaagtgt
1621 gagccagtgt ttattataaa gacatttctt tttccctctc aattccaagg cattggaaaa
1681 agagaggaac aagcagaaga tgcctgcagg tatcactttg atcctatgtg ggagcgactg
1741 aaaatagaat gagcttggtt aagcacctct cctttgccct tcaccctgac tcctgtcact
1801 gtctccatcc ccaaataaag ctgaaatatt tttttaaaaa aaaaaaaaaa aaa
//