LOCUS BC017064 2239 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 3 open reading frame 52, mRNA (cDNA clone
MGC:9585 IMAGE:3885219), complete cds.
ACCESSION BC017064
VERSION BC017064.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2239)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2239)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 22 Row: b Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13375833.
FEATURES Location/Qualifiers
source 1..2239
/db_xref="H-InvDB:HIT000037818"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9585 IMAGE:3885219"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_68"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2239
/gene="C3orf52"
/gene_synonym="FLJ23186"
/gene_synonym="TTMP"
/db_xref="GeneID:79669"
/db_xref="HGNC:HGNC:26255"
CDS 208..660
/gene="C3orf52"
/gene_synonym="FLJ23186"
/gene_synonym="TTMP"
/codon_start=1
/product="chromosome 3 open reading frame 52"
/protein_id="AAH17064.1"
/db_xref="GeneID:79669"
/db_xref="HGNC:HGNC:26255"
/translation="MIITSIFLGVITVIIIGLCLAAVTYVDEDENEILELSSNKTFFI
MLKIPEECVAEEELPHLLTERLTDVYSTSPSLSRYFTSVEIVDFSGENATVTYDLQFG
VPSDDENFMKYMMSEELVLGILLQDFRDQNIPGCESLGLDPTSLLLYE"
BASE COUNT 575 a 447 c 533 g 684 t
ORIGIN
1 cggcacatgg acctggccca accctcacag ccagtagacg agctggagct ctcggtgctc
61 gagcggcagc cagaagagaa cacgcctctc aatggtgccg acaaggtctt cccttctttg
121 gacgaggagg tccccccggc cgaggctaac aaggaaagcc cctggagctc ctgtaataag
181 aatgtggttg gaagatgcaa actgtggatg atcatcacct ccattttcct aggtgtcatt
241 acagtgatca tcataggctt atgtcttgct gcagtaactt atgttgatga agatgaaaat
301 gaaatacttg aattatcatc aaacaaaaca ttcttcatca tgctgaagat tccagaggag
361 tgtgttgctg aagaggaatt gcctcacctg ctcaccgaaa ggctcacaga tgtgtacagt
421 acatcgccct ctctgagtcg ttattttact tcagttgaaa tagtggactt cagtggtgaa
481 aatgccacag taacgtatga cctgcaattt ggggttccat cagatgatga aaattttatg
541 aagtatatga tgagtgagga gttggtgctg ggcattttgc tacaggattt ccgtgatcag
601 aatatacctg gttgtgagag tctggggctt gatccaacat ccctcttgct ctatgaatga
661 agtgatggag gctggtctct gtctgaaagc agtgctctac caagtcctgg agatgaaggg
721 aattcactct gttttgcaga aaagattctg tggattaata cagaagcacc agcaacacca
781 gaggggtgga gactcctttc tctcccgatt ctacagtctg gctctaagcc cagtaaaaca
841 gctcccgagc actgcttcag ctgggtccag tcttgacaaa ggcaggaagc cagctagggt
901 gggggcgata gggtcagcgg gtatgtccca ctgttggagg tcactggtat tctgtttgtt
961 tttgttttgt ttcgttttgt tttttgagac agggtctcgt tctgtcgctt agctggagtg
1021 cggtggcgtg atcatggcac tgctattctt gaagcactcc acccacctgg gctacttttt
1081 ctttagtgca gaggtgcact gtcttctttt aggtgggatc gcgtaagcat gagctggtag
1141 agcacggaga ggcaggcagc caggttacga agactaagcc aattattcac tgaagtcatc
1201 ctcctctccc ccaccattcg atttgatcta cctctaagcc aggctgtgaa gaaaaggaag
1261 gcactttaga agacctcagc agtgtggttc tgtgtctact tccatgacct gtacctgagt
1321 atcttagcca gccagcctta ggaacaccac caaggttact ttgaaatcta tgtatatagc
1381 tagttacaga cgggagctat gtgtttcttc attattttgc agctcctcgt tgttcctgtg
1441 attcctgaac acctttttgg aaatatgggt ctctgtgagt tttgagcaca ctactatcac
1501 tttggatagt cactccattt atatttttat aaacttccat tagagaatca ttaaggctgt
1561 ttaatatctg ctctggatat tacgcattgg ctttttgttg cctagtgcta caaaccttcc
1621 tgtgggactc agtgtcttca ggcaatgatt gtgtatcctg ttacagatgg ttgtgataca
1681 agaagaacca ctcttctttg aaaataaact cttggaagct tttgccagct atctgggggg
1741 taggaggaat attagcaact gtattggttg tctacagata cagaattgcc tgttgtgagg
1801 gaactgattg ttttgttggg aaaagaaatt taccaggaga aagagttttg tgctgtattg
1861 tgagagatct cgcctctcag ttaaatgagc cctgggttaa agtcagtgtg aagggcagct
1921 gtgtgcgggc acgagccaga gtgtctgcct cagactagat ttgacttgag ttctttatga
1981 cccaggactc tggataatgt gaatttgctt tcctatttaa ctagaagata catgtactat
2041 agatcattgt ctcattttag tgattgttcc ttaaactagt gaaactagtg gatttctctt
2101 cttcctcttt attttttgca tgttaaatgt gaaccttagt gtatttgtat tttgtagaaa
2161 ataatgaaaa attttaatgg agaatgattt aaaaacattt acaatacatt atttttgcat
2221 ctgtaaaaaa aaaaaaaaa
//