LOCUS BC017045 4154 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens phosphorylase, glycogen; brain, mRNA (cDNA clone
MGC:9213 IMAGE:3877951), complete cds.
ACCESSION BC017045
VERSION BC017045.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4154)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4154)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC017045.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 14 Row: b Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34577123.
FEATURES Location/Qualifiers
source 1..4154
/db_xref="H-InvDB:HIT000037804"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9213 IMAGE:3877951"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_68"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..4154
/gene="PYGB"
/gene_synonym="MGC9213"
/db_xref="GeneID:5834"
/db_xref="HGNC:HGNC:9723"
/db_xref="MIM:138550"
CDS 85..2616
/gene="PYGB"
/gene_synonym="MGC9213"
/codon_start=1
/product="phosphorylase, glycogen; brain"
/protein_id="AAH17045.1"
/db_xref="GeneID:5834"
/db_xref="HGNC:HGNC:9723"
/db_xref="MIM:138550"
/translation="MAKPLTDSEKRKQISVRGLAGLGDVAEVRKSFNRHLHFTLVKDR
NVATPRDYFFALAHTVRDHLVGRWIRTQQHYYERDPKRIYYLSLEFYMGRTLQNTMVN
LGLQNACDEAIYQLGLDLEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGI
RYEFGIFNQKIVNGWQVEEADDWLRYGNPWEKARPEYMLPVHFYGRVEHTPDGVKWLD
TQVVLAMPYDTPVPGYKNNTVNTMRLWSAKAPNDFKLQDFNVGDYIEAVLDRNLAENI
SRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRTCFETFPDKV
AIQLNDTHPALSIPELMRILVDVEKVDWDKAWEITKKTCAYTNHTVLPEALERWPVSM
FEKLLPRHLEIIYAINQRHLDHVAALFPGDVDRLRRMSVIEEGDCKRINMAHLCVIGS
HAVNGVARIHSEIVKQSVFKDFYELEPEKFQNKTNGITPRRWLLLCNPGLADTIVEKI
GEEFLTDLSQLKKLLPLVSDEVFIRDVAKVKQENKLKFSAFLEKEYKVKINPSSMFDV
HVKRIHEYKRQLLNCLHVVTLYNRIKRDPAKAFVPRTVMIGGKAAPGYHMAKLIIKLV
TSIGDVVNHDPVVGDRLKVIFLENYRVSLAEKVIPAADLSQQISTAGTEASGTGNMKF
MLNGALTIGTMDGANVEMAEEAGAENLFIFGLRVEDVEALDRKGYNAREYYDHLPELK
QAVDQISSGFFSPKEPDCFKDIVNMLMHHDRFKVFADYEAYMQCQAQVDQLYRNPKEW
TKKVIRNIACSGKFSSDRTITEYAREIWGVEPSDLQIPPPNIPRD"
BASE COUNT 900 a 1172 c 1223 g 859 t
ORIGIN
1 cgccagagca gctgcaccat cccggcgttc gcgtgtgccg ccgctttcct cctccatctc
61 ttttcctccg cctccgccgg cgcgatggcg aagccgctga cggacagcga gaagcggaag
121 cagatcagcg tgcgcggcct ggcggggcta ggcgacgtgg ccgaggtgcg gaagagcttc
181 aaccggcact tgcacttcac gctggtcaag gaccgcaatg tggccacgcc ccgcgactac
241 ttcttcgcgc tggcgcacac ggtgcgcgac cacctcgtgg gccgctggat ccgcacgcag
301 cagcactact acgagcgcga ccccaagcgc atttattatc tttccctgga attctacatg
361 ggtcgcacgc tgcagaacac gatggtgaac ctgggccttc agaatgcctg cgatgaagcc
421 atctatcagt tggggttaga cttggaggaa ctcgaggaga tagaagaaga tgctggcctt
481 gggaatggag gcctggggag gctggcagcg tgtttccttg actcaatggc taccttgggc
541 ctggcagcat acggctatgg aatccgctat gaatttggga tttttaacca gaagattgtc
601 aatggctggc aggtagagga ggccgatgac tggctgcgct acggcaaccc ctgggagaaa
661 gcgcggcctg agtatatgct tcccgtgcac ttctacggac gcgtggagca cacccccgac
721 ggcgtgaagt ggctggacac acaggtggtg ctggccatgc cctacgacac cccagtgccc
781 ggctacaaga acaacaccgt caacaccatg cggctgtggt ccgccaaggc tcccaacgac
841 ttcaagctgc aggacttcaa cgtgggagac tacatcgagg cggtcctgga ccggaacttg
901 gctgagaaca tctccagggt cctgtatcca aatgataact tctttgaggg gaaggagctg
961 cggctgaagc aggagtactt cgtggtggcc gccacgctcc aggacatcat ccgccgcttc
1021 aagtcgtcca agttcggctg ccgggaccct gtgagaacct gtttcgagac gttcccagac
1081 aaggtggcca tccagctgaa cgacacccac cccgccctct ccatccctga gctcatgcgg
1141 atcctggtgg acgtggagaa ggtggactgg gacaaggcct gggaaatcac gaagaagacc
1201 tgtgcataca ccaaccacac tgtgctgcct gaggccttgg agcgctggcc cgtgtccatg
1261 tttgagaagc tgctgccgcg gcacctggag ataatctatg ccatcaacca gcggcacctg
1321 gaccacgtgg ccgcgctgtt tcccggcgat gtggaccgcc tgcgcaggat gtctgtgatc
1381 gaggaggggg actgcaagcg gatcaacatg gcccacctgt gtgtgattgg gtcccatgct
1441 gtcaatggtg tggcgaggat ccactcggag atcgtgaaac agtcggtctt taaggatttt
1501 tatgaactgg agccagagaa gttccagaat aagaccaatg gcatcacccc ccgccggtgg
1561 ctgctgctgt gcaacccggg gctggccgat accatcgtgg agaaaattgg ggaggagttc
1621 ctgactgacc tgagccagct gaagaagctg ctgccgctgg tcagtgacga ggtgttcatc
1681 agggacgtgg ccaaggtcaa acaggagaac aagctcaagt tctcggcctt cctggagaag
1741 gagtacaagg tgaagatcaa cccctcctcc atgttcgatg tgcatgtgaa gaggatccac
1801 gagtacaagc ggcagctgct caactgcctg cacgtcgtca ccctgtacaa tcgaatcaag
1861 agagacccgg ccaaggcttt tgtgcccagg actgttatga ttgggggcaa ggcagcgccc
1921 ggttaccaca tggccaagct gatcatcaag ttggtcacct ccatcggcga cgtcgtcaat
1981 catgacccag ttgtgggtga caggttgaaa gtgatcttcc tggagaacta ccgtgtgtcc
2041 ttggctgaga aagtgatccc ggccgctgat ctgtcgcagc agatctccac tgcaggcacc
2101 gaggcctcag gcacaggcaa catgaagttc atgctcaacg gggccctcac catcggcacc
2161 atggacggcg ccaacgtgga gatggccgag gaggccgggg ccgagaacct cttcatcttc
2221 ggcctgcggg tggaggatgt cgaggccttg gaccggaaag ggtacaatgc cagggagtac
2281 tacgaccacc tgcccgagct gaagcaggcc gtggaccaga tcagcagtgg ctttttttct
2341 cccaaggagc cagactgctt caaggacatc gtgaacatgc tgatgcacca tgacaggttc
2401 aaggtgtttg cagactatga agcctacatg cagtgccagg cacaggtgga ccagctgtac
2461 cggaacccca aggagtggac caagaaggtc atcaggaaca tcgcctgctc gggcaagttc
2521 tccagtgacc ggaccatcac ggagtatgca cgggagatct ggggtgtgga gccctccgac
2581 ctgcagatcc cgccccccaa catcccccgg gactaggcac accctgcctt ggcgggacca
2641 gcgggcattt gttttcttgc tgactttgca cctccttttt tccccaaaca ctttgccagc
2701 cactggtggt ccctgctttt ctgagtacca tgtttccagg aggggccatg ggggtcaggg
2761 tggttttgag agagcagggt aaggaaggaa tgtgctagaa gtgctcctag tttcttgtaa
2821 aggaagccag agttgacagt acaaagggtc gtggccagcc ctgcagcttc agcacctgcc
2881 ccacccagag tgggagtcag gtggagccac ctgctgggct cccccagaac tttgcacaca
2941 tcttgctatg tattagccga tgtctttagt gttgagcctc tggattctgg ggtctgggcc
3001 agtggccata gtgaagcctg ggaatgagtg ttactgcagc atctgggctg ccagccacag
3061 ggaagggcca agccccatgt agccccagtc atcctgccca gccctgcctc ctggccatgc
3121 cgggaggggt cggatcctct aggcatcgcc ttcacagccc cctgccccct gccctctgtc
3181 ctggctctgc acctggtata tgggtcatgg acccagatgg ggctttccct ttgtagccat
3241 ccaatgggca ttgtgtgggt gcttggaacc cgggatgact gagggggaca ctggagtggg
3301 tgcttgtgtc tgctgtctca gaggccttgg tcaggatgaa gttggctgac acagcttagc
3361 ttggttttgc ttattcaaaa gagaaaataa ctacacatgg aaatgaaact agctgaagcc
3421 ttttcttgtt ttagcaactg aaaattgtac ttggtcactt ttgtgcttga ggaggcccat
3481 tttctgcctg gcagggggca ggtctgtgcc ctcccgctga ctcctgctgt gtcctgaggt
3541 gcatttcctg ttgtacacac aagggccagg ctccattctc cctccctttc caccagtgcc
3601 acagcctcgt ctggaaaaag gaccaggggt cccggaggaa cccatttgtg ctctgcttgg
3661 acagcaggcc tggcactggg aggtgggggt gagcccctca cagccttgcc cctccccaag
3721 gctggcaacc tgcctcccat tgcccaagag agagggcagg gaacaggcta ctgtccttcc
3781 ctgtggaatt gccgagaaat ctagcacctt gcatgctgga tctgggctgc ggggaggctc
3841 tttttctccc tggcctccag tgcccaccag gaggatctgc gcacggtgca cagcccacca
3901 gagcactaca gccttttatt gagtggggca agtgctgggc tgtggtcgtg ccctgacagc
3961 atcttcccca ggcagcggct ctgtggagga ggccatactc ccctagttgg ccactggggc
4021 caccaccctg accaccactg tgcccctcat tgttactgcc ttgtgagata aaaactgatt
4081 aaacctttgt ggctgtggtt ggcaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
4141 aaaaaaaaaa aaaa
//