LOCUS BC017029 1650 bp mRNA linear HUM 30-SEP-2003
DEFINITION Homo sapiens farnesyltransferase, CAAX box, alpha, mRNA (cDNA clone
IMAGE:3850453), partial cds.
ACCESSION BC017029
VERSION BC017029.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1650)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1650)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC017029.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 20 Row: m Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4503770.
FEATURES Location/Qualifiers
source 1..1650
/db_xref="H-InvDB:HIT000037797"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3850453"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_65"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1650
/gene="FNTA"
/gene_synonym="FPTA"
/gene_synonym="PGGT1A"
/db_xref="GeneID:2339"
/db_xref="MIM:134635"
CDS <1..1131
/gene="FNTA"
/gene_synonym="FPTA"
/gene_synonym="PGGT1A"
/codon_start=1
/product="FNTA protein"
/protein_id="AAH17029.2"
/db_xref="GeneID:2339"
/db_xref="MIM:134635"
/translation="TEGVGEAAQGGEPGQPAQPPPQPHPPPPQQQHKEEMAAEAGEAV
ASPMDDGFVSLDSPSYVLYRDRAEWADIDPVPQNDGPNPVVQIIYSDKFRDVYDYFRA
VLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQP
KNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQ
YVDQLLKEDVRNNSVWNQRYFVISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNY
LKGILQDRGLSKYPNLLNQLLDLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKA
LELCEILAKEKDTIRKEYWRYIGRSLQSKHSTENDSPTNVQQ"
misc_feature 229..861
/gene="FNTA"
/gene_synonym="FPTA"
/gene_synonym="PGGT1A"
/note="BET4; Region: Protein prenyltransferase, alpha
subunit [Posttranslational modification, protein turnover,
chaperones]"
/db_xref="CDD:COG5536"
BASE COUNT 515 a 335 c 380 g 420 t
ORIGIN
1 accgaggggg tcggggaggc tgcgcaaggg ggcgagcccg ggcagccggc gcaacccccg
61 ccccagccgc acccaccgcc gccccagcag cagcacaagg aagagatggc ggccgaggct
121 ggggaagccg tggcgtcccc catggacgac gggtttgtga gcctggactc gccctcctat
181 gtcctgtaca gggacagagc agaatgggct gatatagatc cggtgccgca gaatgatggc
241 cccaatcccg tggtccagat catttatagt gacaaattta gagatgttta tgattacttc
301 cgagctgtcc tgcagcgtga tgaaagaagt gaacgagctt ttaagctaac ccgggatgct
361 attgagttaa atgcagccaa ttatacagtg tggcatttcc ggagagttct tttgaagtca
421 cttcagaagg atctacatga ggaaatgaac tacatcactg caataattga ggagcagccc
481 aaaaactatc aagtttggca tcataggcga gtattagtgg aatggctaag agatccatct
541 caggagcttg aatttattgc tgatattctt aatcaggatg caaagaatta tcatgcctgg
601 cagcatcgac aatgggttat tcaggaattt aaactttggg ataatgagct gcagtatgtg
661 gaccaacttc tgaaagagga tgtgagaaat aactctgtct ggaaccaaag atacttcgtt
721 atttctaaca ccactggcta caatgatcgt gctgtattgg agagagaagt ccaatacact
781 ctggaaatga ttaaactagt accacataat gaaagtgcat ggaactattt gaaagggatt
841 ttgcaggatc gtggtctttc caaatatcct aatctgttaa atcaattact tgatttacaa
901 ccaagtcata gttcccccta cctaattgcc tttcttgtgg atatctatga agacatgcta
961 gaaaatcagt gtgacaataa ggaagacatt cttaataaag cattagagtt atgtgaaatc
1021 ctagctaaag aaaaggacac tataagaaag gaatattgga gatacattgg aagatccctt
1081 caaagcaaac acagcacaga aaatgactca ccaacaaatg tacagcaata acaccatcca
1141 gaagaacttg atggaatgct tttatttttt attaagggac cctgcaggag tttcacacga
1201 gagtggtcct tccctttgcc tgtggtgtaa aagtgcatca cacaggtatt gctttttaac
1261 aagaactgat gctccttggg tgctgctgct actcagacta gctctaagta atgtgattct
1321 tctaaagcaa agtcattgga tgggaggagg aagaaaaagt cccataaagg aacttttgta
1381 gtcttatcaa catataatct aatcccttag catcagctcc tccctcagtg gtacatgcgt
1441 caagatttgt agcagtaata actgcaggtc acttgtatgt aatggatgtg aggtagccga
1501 agtttggttc agtaagcagg gaatacagtc gttccatcag agctggtctg cacactcaca
1561 ttatcttgct atcactgtaa ccaactaatg ccaaaagaac ggttttgtaa taaaattata
1621 gctgtatcta aaaacaaaaa aaaaaaaaaa
//