LOCUS BC017016 1141 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens Lck interacting transmembrane adaptor 1, mRNA (cDNA
clone MGC:8864 IMAGE:3847069), complete cds.
ACCESSION BC017016
VERSION BC017016.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1141)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1141)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 20 Row: h Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8923377.
FEATURES Location/Qualifiers
source 1..1141
/db_xref="H-InvDB:HIT000037786"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8864 IMAGE:3847069"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_65"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1141
/gene="LIME1"
/gene_synonym="dJ583P15.4"
/gene_synonym="FLJ20406"
/gene_synonym="LIME"
/gene_synonym="LP8067"
/gene_synonym="RP4-583P15.5"
/db_xref="GeneID:54923"
/db_xref="HGNC:HGNC:26016"
/db_xref="MIM:609809"
CDS 36..923
/gene="LIME1"
/gene_synonym="dJ583P15.4"
/gene_synonym="FLJ20406"
/gene_synonym="LIME"
/gene_synonym="LP8067"
/gene_synonym="RP4-583P15.5"
/codon_start=1
/product="Lck interacting transmembrane adaptor 1"
/protein_id="AAH17016.1"
/db_xref="GeneID:54923"
/db_xref="HGNC:HGNC:26016"
/db_xref="MIM:609809"
/translation="MGLPVSWAPPALWVLGCCALLLSLWALCTACRRPEDAVAPRKRA
RRQRARLQGSATAAEASLLRRTHLCSLSKSDTRLHELHRGPRSSRALRPASMDLLRPH
WLEVSRDITGPQAAPSAFPHQELPRALPAAAATAGCAGLEATYSNVGLAALPGVSLAA
SPVVAEYARVQKRKGTHRSPQEPQQGKTEVTPAAQVDVLYSRVCKPKRRDPGPTTDPL
DPKGQGAILALAGDLAYQTLPLRALDVDSGPLENVYESIRELGDPAGRSSTCGAGTPP
ASSCPSLGRGWRPLPASLP"
BASE COUNT 194 a 417 c 376 g 154 t
ORIGIN
1 cccctggccg tgggcttggg cctcggcttc acaggatggg gctgccagtg tcctgggccc
61 ctcctgccct ctgggttcta gggtgctgcg ccctgctcct ctcgctgtgg gcgctgtgca
121 cagcctgccg caggcccgag gacgctgtag cccccaggaa gagggcgcgg aggcagcggg
181 cgaggctgca gggcagtgcg acggcggcgg aagcgtccct actgaggcgg acccacctct
241 gctccctcag caagtcggac accagactgc acgagctgca ccggggcccg cgcagcagca
301 gggccctgcg gcctgccagc atggatctcc tgcgcccaca ctggctggag gtgtccaggg
361 acatcaccgg accgcaggca gccccctctg ccttcccaca ccaggagctg ccccgggctc
421 tgccggcagc tgcagccacc gcagggtgcg ctggcctcga ggccacctat tccaacgtgg
481 ggctggcggc ccttcccggg gtcagcctgg cggccagccc tgtggtggcc gagtatgccc
541 gcgtccagaa gcgcaaaggg acccatcgca gtccccaaga gccacagcag gggaagactg
601 aggtgacccc ggccgctcag gtggacgtcc tgtactccag ggtctgcaag cctaaaagga
661 gggacccagg acccaccaca gacccgctgg accccaaggg ccagggagcg attctggccc
721 tggcgggtga cctggcctac cagaccctcc cgctcagggc cctggatgtg gacagcggcc
781 ccctggaaaa cgtgtatgag agcatccggg agctggggga ccctgctggc aggagcagca
841 cgtgcggggc tgggacgccc cctgcttcca gctgccccag cctagggagg ggctggagac
901 ccctccctgc ctccctgccc tgaacactca aggacctgtg ctccttcctc cagagtgagg
961 cccgtccccc gccccgcccc gcctcacagc tgacagcgcc agtcccaggt ccccgggccg
1021 ccagcccgtg aggtccgtga ggtcctggcc gctctgacag ccgcggcctc cccgggctcc
1081 agagaaggcc cgcgtctaaa taaagcgcca gcgcaggatg aaagcgaaaa aaaaaaaaaa
1141 a
//