LOCUS BC017005 1443 bp mRNA linear HUM 30-SEP-2003
DEFINITION Homo sapiens sulfatase modifying factor 1, mRNA (cDNA clone
IMAGE:4430514), partial cds.
ACCESSION BC017005
VERSION BC017005.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1443)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1443)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC017005.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 27 Row: n Column: 6.
FEATURES Location/Qualifiers
source 1..1443
/db_xref="H-InvDB:HIT000089152"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4430514"
/tissue_type="Prostate, adenocarcinoma."
/clone_lib="NIH_MGC_91"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1443
/gene="SUMF1"
/gene_synonym="FGE"
/db_xref="GeneID:285362"
/db_xref="MIM:607939"
CDS <1..401
/gene="SUMF1"
/gene_synonym="FGE"
/codon_start=3
/product="SUMF1 protein"
/protein_id="AAH17005.2"
/db_xref="GeneID:285362"
/db_xref="MIM:607939"
/translation="LFPWGNKLQPKGQHYANIWQGEFPVTNTGEDGFQGTAPVDAFPP
NGYGLYNIVGNAWEWTSDWWTVHHSVEETLNPKGPPSGKDRVKKGGSYMCHRSYCYRY
RCAARSQNTPDSSASNLGFRCAADRLPTMD"
misc_feature 3..377
/gene="SUMF1"
/gene_synonym="FGE"
/note="DUF323; Region: Domain of unknown function
(DUF323). This presumed domain is found in bacterial
proteins. In some cases these proteins also contain a
protein kinase domain. The function of this domain is
unknown"
/db_xref="CDD:pfam03781"
BASE COUNT 388 a 313 c 353 g 389 t
ORIGIN
1 gacttttccc ctggggcaac aaactgcagc ccaaaggcca gcattatgcc aacatttggc
61 agggcgagtt tccggtgacc aacactggtg aggatggctt ccaaggaact gcgcctgttg
121 atgccttccc tcccaatggt tatggcttat acaacatagt ggggaacgca tgggaatgga
181 cttcagactg gtggactgtt catcattctg ttgaagaaac gcttaaccca aaaggtcccc
241 cttctgggaa agaccgagtg aagaaaggtg gatcctacat gtgccatagg tcttattgtt
301 acaggtatcg ctgtgctgct cggagccaga acacacctga tagctctgct tcgaatctgg
361 gattccgctg tgcagccgac cgcctgccca ctatggactg acaaccaagg aaagtcttcc
421 ccagtccaag gagcagtcgt gtctgaccta cattgggctt ttctcagaac tttgaacgat
481 cccatgcaaa gaattcccac cctgaggtgg gttacatacc tgcccaatgg ccaaaggaac
541 cgccttgtga gaccaaattg ctgacctggg tcagtgcatg tgctttatgg tgtggtgcat
601 ctttggagat catcgccata ttttactttt gagagtcttt aaagaggaag gggagtggag
661 ggaaccctga gctaggcttc aggaggcccg cgtcctacgc aggctctgcc acaggggtta
721 gaccccaggt ccgacgcttg accttcctgg gcctcaagtg ccctccccta tcaaatgaag
781 ggatggacag catgacctct gggtgtctct ccaactcacc agttctaaaa agggtatcag
841 attctattgt gacttcatag tgagaattta tgatagatta ttttttagct attttttcca
901 tgtgtgaacc ttgagtgata ctaatcatgt aaagtaagag ttctcttatg tattattttc
961 ggaagagggg tgtggtgact cctttatatt cgtactgcac tttgtttttc caaggaaatc
1021 agtgtctttt acgttgttat gatgaatccc acatggggcc ggtgatggta tgctgcagtt
1081 cagccgttga acacatagga atgtctgtgg ggtgactcta ctgtgcttta tcttttaaca
1141 ttaagtgcct ttggttcaga ggggcagtca taagctctgt ttccccctct ccccaaagcc
1201 ttcagcgaac gtgaaatgtg cgctaaacgg ggaaacctgt ttaattctag atatagggaa
1261 aaaggaacga ggaccttgaa tgagctatat tcagggtatc cggtattttg taatagggaa
1321 taggaaacct tgttggctgt ggaatatccg atgctttgaa tcatgcactg tgttgaataa
1381 acgtatctgc taaatcagga aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1441 aaa
//