LOCUS BC016946 2428 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens WD repeat domain 77, mRNA (cDNA clone MGC:21473
IMAGE:3845908), complete cds.
ACCESSION BC016946
VERSION BC016946.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2428)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2428)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 20 Row: f Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: Similarity but not
identity to protein.
FEATURES Location/Qualifiers
source 1..2428
/db_xref="H-InvDB:HIT000037763"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21473 IMAGE:3845908"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_65"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2428
/gene="WDR77"
/gene_synonym="HKMT1069"
/gene_synonym="MEP50"
/gene_synonym="MGC2722"
/gene_synonym="Nbla10071"
/gene_synonym="RP11-552M11.3"
/db_xref="GeneID:79084"
/db_xref="HGNC:HGNC:29652"
CDS 40..1068
/gene="WDR77"
/gene_synonym="HKMT1069"
/gene_synonym="MEP50"
/gene_synonym="MGC2722"
/gene_synonym="Nbla10071"
/gene_synonym="RP11-552M11.3"
/codon_start=1
/product="WD repeat domain 77"
/protein_id="AAH16946.1"
/db_xref="GeneID:79084"
/db_xref="HGNC:HGNC:29652"
/translation="MRKETPPPLVPPAAREWNLPPNAPACMERQLEAARYRSDGALLL
GASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGERGILVASDSGA
VELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVL
SSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSL
AWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSE
DCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEPLPA
PGPASVTE"
BASE COUNT 592 a 549 c 600 g 687 t
ORIGIN
1 cgtccagttt gagtctaggt tggagttgga accgtggaga tgcggaagga aaccccaccc
61 cccctagtgc ccccggcggc ccgggagtgg aatcttcccc caaatgcgcc cgcctgcatg
121 gaacggcagt tggaggctgc gcggtaccgg tccgatgggg cgcttctcct cggggcctcc
181 agcctgagtg ggcgctgctg ggccggctcc ctctggcttt ttaaggaccc ctgtgccgcc
241 cccaacgaag gcttctgctc cgccggagtc caaacggagg ctggagtggc tgacctcact
301 tgggttgggg agagaggtat tctagtggcc tccgattcag gtgctgttga attgtgggaa
361 ctagatgaga atgagacact tattgtcagc aagttctgca agtatgagca tgatgacatt
421 gtgtctacag tcagtgtctt gagctctggc acacaagctg tcagtggtag caaagacatc
481 tgcatcaagg tttgggacct tgctcagcag gtggtactga gttcataccg agctcatgct
541 gctcaggtca cttgtgttgc tgcctctcct cacaaggact ctgtgtttct ttcatgcagc
601 gaggacaata gaattttact ctgggatacc cgctgtccca agccagcatc acagattggc
661 tgcagtgcgc ctggctacct tcctacctcg ctggcttggc atcctcagca aagtgaagtc
721 tttgtctttg gtgatgagaa tgggacagtc tcccttgtgg acaccaagag tacaagctgt
781 gtcctgagct cagctgtaca ctcccagtgt gtcactgggc tggtgttctc cccacacagt
841 gttcccttcc tggcctctct cagtgaagac tgctcacttg ctgtgctgga ctcaagcctt
901 tctgagttgt ttagaagcca agcccacaga gactttgtga gagatgcgac ttggtccccg
961 ctcaatcact ccctgcttac cacagtgggc tgggaccatc aggtcgtcca ccacgttgtg
1021 cccacagaac ctctcccagc ccctggacct gcaagtgtta ctgagtagat tggatttaag
1081 acaaaaagca agtcccccat gagtgtccac ttctttgccc tgccctctca gcttgtgaga
1141 caacacagga gccttctata gtatgttgat atgctagatc tgtgccgtta ataggcatcg
1201 tctctcagcc tgagggaggc tggattctgg gttcctgtag tcacagggag gaaaagcttt
1261 cttaaaaatg gacatgtatg tgcgtgtgag tgtgtgtgta gatttatagt ttttggtagt
1321 ggcaggaata aaaaaaatcc atcctacatc ttccctaagc actgcctctc tctcaccccc
1381 caaaacaagt tgacgaaagg gttttatgta gctgtctatg aggaattggc cgtgtctggg
1441 tgggttatgg gatgtgggca tccctgggtt cttggaagca gctcttatgc tactcataga
1501 gatgggattg actttatttt tttatagtgc ttaattcacc attatgagaa atgcttccag
1561 tcacaaaaat gcagcccagc tcactctgag gaagaagcag gacttggtac ggttttacac
1621 aactccttac cattaaactg aatcagaaat ccattttctg gctgaataaa aagtttggct
1681 tgcctgtgta atgcccactc ccttccccct ggctccctag tgatgggaca tatatgagag
1741 agaagtgttt ttctatcata gacaccatag gggaaagttt ggggatgaag gagagcttaa
1801 aggtgtttca attaagttag aaaactgaca caggctgttg agaattcttt gccacttttc
1861 ccaccccaaa acagcatggg gcctgacatc ttctgccctg gtcccctttc tcttgatgtg
1921 gaaagtctga atgcagtatt tatagacttc taaggtttta aaatccagta tcaagaagaa
1981 aatcagaaat actggttggt gaaataaaga gtttaggcat tgttggcctg tcttttttga
2041 agcatgtgtg ttatgtgtag ttagatatat ttcacttatg tgagtcatca tggtgttggt
2101 cttgtagccc attatttttc ctgtgcttcc ccagcttccc aaagtagcta gttagaactt
2161 aaggtaaata tttattcttg ggttggtgga gtggatattg ccagttagga gtcatggatc
2221 aattactgat tatattgaaa gtaaatataa tcaattatgt acttttgagc tttgcaggtt
2281 caatttaggt aaaaatcaca ttatgaaact gggaaagtct gaaggaatat gggcaaaata
2341 tttctcagta aagcttccat gcttcaccct tgacatgatt acccttgagt aaaacatggg
2401 aatttgtaaa aaaaaaaaaa aaaaaaaa
//