LOCUS BC016928 2033 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens ornithine aminotransferase (gyrate atrophy), mRNA (cDNA clone MGC:21248 IMAGE:3913352), complete cds. ACCESSION BC016928 VERSION BC016928.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2033) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2033) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 22 Row: k Column: 21 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4557808. FEATURES Location/Qualifiers source 1..2033 /db_xref="H-InvDB:HIT000037753" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:21248 IMAGE:3913352" /tissue_type="Uterus, leiomyosarcoma" /clone_lib="NIH_MGC_71" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2033 /gene="OAT" /gene_synonym="HOGA" /db_xref="GeneID:4942" /db_xref="HGNC:HGNC:8091" /db_xref="MIM:258870" CDS 66..1385 /gene="OAT" /gene_synonym="HOGA" /codon_start=1 /product="ornithine aminotransferase (gyrate atrophy)" /protein_id="AAH16928.1" /db_xref="GeneID:4942" /db_xref="HGNC:HGNC:8091" /db_xref="MIM:258870" /translation="MFSKLAHLQRFAVLSRGVHSSVASATSVATKKTVQGPPTSDDIF EREYKYGAHNYHPLPVALERGKGIYLWDVEGRKYFDFLSSYSAVNQGHCHPKIVNALK SQVDKLTLTSRAFYNNVLGEYEEYITKLFNYHKVLPMNTGVEAGETACKLARKWGYTV KGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPYNDLPALERA LQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWL AVDYENVRPDIVLLGKALSGGLYPVSAVLCDDDIMLTIKPGEHGSTYGGNPLGCRVAI AALEVLEEENLAENADKLGIILRNELMKLPSDVVTAVRGKGLLNAIVIKETKDWDAWK VCLRLRDNGLLAKPTHGDIIRFAPPLVIKEDELRESIEIINKTILSF" BASE COUNT 583 a 377 c 450 g 623 t ORIGIN 1 cgccgcgtgt acccggttgt cctcaggcgc tgtcagatct gtggtttttc tacttgaagg 61 acacaatgtt ttccaaacta gcacatttgc agaggtttgc tgtacttagt cgcggagttc 121 attcttcagt ggcttctgct acatctgttg caactaaaaa aacagtccaa ggccctccaa 181 cctctgatga catttttgaa agggaatata agtatggtgc acacaactac catcctttac 241 ctgtagccct ggagagagga aaaggtattt acttatggga tgtagaaggc agaaaatatt 301 ttgacttcct gagttcttac agtgctgtca accaagggca ttgtcacccc aagattgtga 361 atgctctgaa gagtcaagtg gacaaattga ccttaacatc tagagctttc tataataacg 421 tacttggtga atatgaggag tatattacta aacttttcaa ctaccacaaa gttcttccta 481 tgaatacagg agtggaggct ggagagactg cctgtaaact agctcgtaag tggggctata 541 ccgtgaaggg cattcagaaa tacaaagcaa agattgtttt tgcagctggg aacttctggg 601 gtaggacgtt gtctgctatc tccagttcca cagacccaac cagttacgat ggttttggac 661 catttatgcc gggattcgac atcattccct ataatgatct gcccgcactg gagcgtgctc 721 ttcaggatcc aaatgtggct gcgttcatgg tagaaccaat tcagggtgaa gcaggcgttg 781 ttgttccgga tccaggttac ctaatgggag tgcgagagct ctgcaccagg caccaggttc 841 tctttattgc tgatgaaata cagacaggat tggccagaac tggtagatgg ctggctgttg 901 attatgaaaa tgtcagacct gatatagtcc tccttggaaa ggccctttct gggggcttat 961 accctgtgtc tgcagtgctg tgtgatgatg acatcatgct gaccattaag ccaggggagc 1021 atgggtccac atacggtggc aatccactag gctgccgagt ggccatcgca gcccttgagg 1081 ttttagaaga agaaaacctt gctgaaaatg cagacaaatt gggcattatc ttgagaaatg 1141 aactcatgaa gctaccttct gatgttgtaa ctgccgtaag aggaaaagga ttattaaacg 1201 ctattgtcat taaagaaacc aaagattggg atgcttggaa ggtgtgtcta cgacttcgag 1261 ataatggact tctggccaag ccaacccatg gcgacattat caggtttgcg cctccgctgg 1321 tgatcaagga ggatgagctt cgagagtcca ttgaaattat taacaagacc atcttgtctt 1381 tctgagggta gccagctgtt ttcagtggtc cctgggagcc agctggagac aggtggtcct 1441 gtaaaagctt tattcctaat gtgggcacat tccactccca tgagtcttca aaaacttttt 1501 ttttgaatat atttttttca gttgatacat aatagaacaa cgtttatgaa cctgccgttt 1561 gctttgtaac gtaactaaat aatgtaatgg catctatatt cagttgaagt gttttgatgt 1621 gcatgtgtac ttcctaaggt gaaatgcatc tatatacaga cagcctctaa atcaagtcct 1681 tcagtataat tgatatatgt ttttataatt tcctcactgg tataagtgtt tcatatttga 1741 aaaagttatc tctgggtatt gcataaaagg cttcatctta taaagtgaaa tcattgttat 1801 tgaattttag gaaggattaa tggttaagtg tatataaaat actaatatta agtaaacttc 1861 atattggcca acaccagggt tgtattctat ggatgtcatt attttgaatt aagaattagt 1921 gtttaacatt cctaaattgt tttgagtgct tgattataat ttgtaaaaaa tgtttatttt 1981 caatacttct ttaaatttaa aataaagctt atatttcaaa aaaaaaaaaa aaa //