LOCUS BC016910 1344 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens GA binding protein transcription factor, beta subunit
1, mRNA (cDNA clone MGC:21080 IMAGE:4428422), complete cds.
ACCESSION BC016910
VERSION BC016910.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1344)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1344)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 27 Row: m Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 68215703.
FEATURES Location/Qualifiers
source 1..1344
/db_xref="H-InvDB:HIT000037742"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21080 IMAGE:4428422"
/tissue_type="Prostate, adenocarcinoma."
/clone_lib="NIH_MGC_91"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1344
/gene="GABPB1"
/gene_synonym="BABPB2"
/gene_synonym="E4TF1"
/gene_synonym="E4TF1-47"
/gene_synonym="E4TF1-53"
/gene_synonym="E4TF1B"
/gene_synonym="GABPB"
/gene_synonym="NRF2B1"
/gene_synonym="NRF2B2"
/db_xref="GeneID:2553"
/db_xref="HGNC:HGNC:4074"
/db_xref="MIM:600610"
CDS 110..1192
/gene="GABPB1"
/gene_synonym="BABPB2"
/gene_synonym="E4TF1"
/gene_synonym="E4TF1-47"
/gene_synonym="E4TF1-53"
/gene_synonym="E4TF1B"
/gene_synonym="GABPB"
/gene_synonym="NRF2B1"
/gene_synonym="NRF2B2"
/codon_start=1
/product="GA binding protein transcription factor, beta
subunit 1"
/protein_id="AAH16910.1"
/db_xref="GeneID:2553"
/db_xref="HGNC:HGNC:4074"
/db_xref="MIM:600610"
/translation="MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHL
AAQYGHYSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDM
LKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAM
QNQINTNPESPDTVTIHAATPQFIIGPGGVVNLTGLVSSENSSKATDETGVSAVQFGN
SSTSVLATLAALAEASAPLSNSSETPVVATEEVVTAESVDGAIQQVVSSGGQQVITIV
TDGIQLGNLHSIPTSGIGQPIIVTMPDGQQVLTVPATDIAEETVISEEPPAKRQCIEI
IENRVESAEIEVRSLLPGVLCRSHPK"
BASE COUNT 412 a 278 c 300 g 354 t
ORIGIN
1 agcgctttgt gtgtagcggg gccgcgtcag cccggccggg tacgaggcgc ctcgggtccc
61 cgcaccacct cctgctgcct tcccgtcgcc gctcccgaag cttttccaga tgtccctggt
121 agatttggga aagaagcttt tagaagcggc acgagcaggt caagatgatg aagttcgtat
181 tttgatggca aatggagctc cctttactac agactggctg ggaacttctc cacttcatct
241 agcagcacag tatggtcatt attccaccac agaggtactg ctgcgagctg gtgtgagcag
301 agatgccaga accaaagtgg accgaacacc attacatatg gcagcttctg agggccatgc
361 cagcatagta gaggttttac ttaagcatgg tgctgatgtc aatgcaaagg acatgttaaa
421 gatgacagct ctccattggg ccacagaaca caatcatcaa gaggtggtgg aacttttaat
481 caaatatggt gctgatgtac acacgcaaag taaattttgt aaaactgcat ttgatatttc
541 aatagacaat ggaaatgaag atttagcaga gatattacag attgctatgc agaaccaaat
601 caacacaaac ccagagagtc ctgacactgt gacaatacat gctgcaacac cacagtttat
661 cattggacct ggaggggtgg tgaacctaac aggtctggta tcttcagaaa attcatccaa
721 ggcaacagat gaaacgggtg tatctgctgt tcagtttgga aactcttcta catcagtatt
781 agctacatta gctgccttag ctgaagcatc tgctccattg tccaattctt cagaaactcc
841 agtagtggcc acagaagaag tagttactgc agaatctgtg gatggtgcca ttcagcaagt
901 agttagttca gggggtcagc aagtcatcac aatagttaca gatggaattc agcttggaaa
961 tttgcactct attccaacca gtggaattgg tcagcccatc attgtgacca tgccagatgg
1021 acaacaagta ttaacagtac cagcaacaga cattgctgaa gaaactgtta taagtgaaga
1081 accaccagct aagagacaat gtatcgaaat aattgaaaac cgggtggaat ctgcagaaat
1141 agaagtaagg agtcttttac ccggtgtgct ttgccgcagt catccaaaat aaattcaatt
1201 ttttttgtct tttatattta ttactgacag tattgttttg atacagaatg aaagtgcgta
1261 gtattttcat tttgtttatt tttgccttat acatatagca agccctcaat aaataaatat
1321 tgaatgaaaa aaaaaaaaaa aaaa
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