LOCUS BC016869 2142 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 20 open reading frame 72, mRNA (cDNA clone
MGC:17602 IMAGE:3850853), complete cds.
ACCESSION BC016869
VERSION BC016869.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2142)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2142)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 20 Row: m Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19923657.
FEATURES Location/Qualifiers
source 1..2142
/db_xref="H-InvDB:HIT000037734"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17602 IMAGE:3850853"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_65"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2142
/gene="C20orf72"
/gene_synonym="bA504H3.4"
/gene_synonym="FLJ14597"
/db_xref="GeneID:92667"
/db_xref="HGNC:HGNC:16205"
CDS 83..1117
/gene="C20orf72"
/gene_synonym="bA504H3.4"
/gene_synonym="FLJ14597"
/codon_start=1
/product="chromosome 20 open reading frame 72"
/protein_id="AAH16869.1"
/db_xref="GeneID:92667"
/db_xref="HGNC:HGNC:16205"
/translation="MKMKLFQTICRQLRSSKFSVESAALVAFSTSSYSCGRKKKVNPY
EEVDQEKYSNLVQSVLSSRGVAQTPGSVEEDALLCGPVSKHKLPNQGEDRRVPQNWFP
IFNPERSDKPNASDPSVPLKIPLQRNVIPSVTRVLQQTMTKQQVFLLERWKQRMILEL
GEDGFKEYTSNVFLQGKRFHEALESILSPQETLKERDENLLKSGYIESVQHILKDVSG
VRALESAVQHETLNYIGLLDCVAEYQGKLCVIDWKTSEKPKPFIQSTFDNPLQVVAYM
GAMNHDTNYSFQVQCGLIVVAYKDGSPAHPHFMDAELCSQYWTKWLLRLEEYTEKKKN
QNIQKPEYSE"
BASE COUNT 664 a 429 c 498 g 551 t
ORIGIN
1 agcgaagtgt ggtggcttcc aaggaataca aacataaagg ccttcgaccg ttgcaaatag
61 actaaagtga aaacaaatct gaatgaagat gaagttattt cagaccattt gcaggcagct
121 caggagttca aagttttctg tggaatcagc tgcccttgtg gctttctcta cttcctctta
181 ctcatgtggc cggaagaaaa aagtgaaccc atatgaagaa gtggaccaag aaaaatactc
241 taatttagtt cagtctgtct tgtcatccag aggcgtcgcc cagaccccgg gatcggtgga
301 ggaagatgct ttgctctgtg gacccgtgag caagcataag ctgccaaacc aaggtgagga
361 cagacgagtg ccacaaaact ggtttcctat cttcaatcca gagagaagtg ataaaccaaa
421 tgcaagtgat ccttcagttc ctttgaaaat ccccttgcaa aggaatgtga taccaagtgt
481 gacccgagtc cttcagcaga ccatgacaaa acaacaggtt ttcttgttgg agaggtggaa
541 acagcggatg attctggaac tgggagaaga tggctttaaa gaatacactt caaacgtctt
601 tttacaaggg aaacggttcc acgaagcctt ggaaagcata ctttcacccc aggaaacctt
661 aaaagagaga gatgaaaatc tcctcaagtc tggttacatt gaaagtgtcc agcatattct
721 gaaagatgtc agtggagtgc gagctcttga aagtgctgtt caacatgaaa ccttaaacta
781 tataggtctg ctggactgtg tggctgagta tcagggcaag ctctgtgtga ttgattggaa
841 gacatcagag aaaccaaagc cttttattca aagtacattt gacaacccac tgcaagttgt
901 ggcatacatg ggtgccatga accatgatac caactacagc tttcaggttc aatgtggctt
961 aattgtggtg gcctacaaag atggatcacc tgcccaccca catttcatgg atgcagagct
1021 ctgttcccag tactggacca agtggcttct tcgactagaa gaatatacgg aaaagaaaaa
1081 gaaccagaat attcagaaac cagaatattc agaataggga gcaagttgct atttgggaac
1141 attcagcacc ttctcacagt ttgggaacat atattgctgt ttactccagt gtaaaaatga
1201 ggtgccactg gatctgagtg ctacacgaac acaagtagaa gtattaattt gttgaaatgt
1261 gttgttacca aaaagactga aaagccccaa agtctagata taaagaccta gacttcggca
1321 cgcgaaatcc cagctatgct acctcttatt tacctgaaag gaggacacgc aggatgggca
1381 gtcatgctgg tgactcttgt actcccttga gggacattgg gggggggggg gcgtggtccc
1441 aggcaggatg cccagtcttt gagctgagat tggaaggcag tgaggctgag ggtgccaaga
1501 tttccccagg gttcacccag aggggaaggg gctacatgcc cccagctgtg tgcagggagg
1561 acacatcagc ccactaccgc tgccaacacc aatgcctaaa acttgtttca tacattgggg
1621 ttttctatat atttcagctg ggaaaagctt acatttaacc ttttgaaaaa ataaatacgt
1681 gattagcctc aactaaacat tgctgactat aaagacagta tattcaccat gtcgctggca
1741 atatgtcatt gcgtaacacc aaataacccc ccagaagtag ccagaggcca gtttgaacat
1801 cacaattcta agtgttttag taactatttc tggcgtgagt caacagatca tgtagataga
1861 gtcaattatt gtttgtggag tttttcagct ataggggagg ggaactatta aaatccattt
1921 gtttctattc aataggtaat aaaaattagt tgtccctggg tttgggaaac ttaaatgccc
1981 attacagccc tggggaaggg ttttctgtct tatggagtga gtcttagcat ttaagttata
2041 cagttgctgc cttaaaatag tagcctgcta caatgacttc tttgggtagc cattttcata
2101 agaaataaaa tacaagatat gagtaaaaaa aaaaaaaaaa aa
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