LOCUS BC016826 1564 bp mRNA linear HUM 26-APR-2004
DEFINITION Homo sapiens hematopoietic SH2 domain containing, mRNA (cDNA clone
IMAGE:4109181), partial cds.
ACCESSION BC016826
VERSION BC016826.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1564)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1564)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 32 Row: b Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1564
/db_xref="H-InvDB:HIT000050659"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4109181"
/tissue_type="Bone marrow, acute myelogenous leukemia"
/clone_lib="NIH_MGC_55"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene <1..1564
/gene="HSH2D"
/gene_synonym="ALX"
/gene_synonym="FLJ14886"
/gene_synonym="HSH2"
/db_xref="GeneID:84941"
/db_xref="MIM:608349"
CDS <1..795
/gene="HSH2D"
/gene_synonym="ALX"
/gene_synonym="FLJ14886"
/gene_synonym="HSH2"
/codon_start=1
/product="HSH2D protein"
/protein_id="AAH16826.1"
/db_xref="GeneID:84941"
/db_xref="MIM:608349"
/translation="GDSYSEGLGHPRVSQVAHTFHQQKPIEPRRELLTQPCRQKDPAN
VDYEDLFLYPNAVAEEAACPVSAPEEASPKPVLCHQSKERKPSAEMNRITTKEATSSC
PPKSPLGETRQKLWRSLKMLPERGQRVRQQLKSHLATVNLSSLLDVRRSTVISGPGTG
KGSQDHSGDPTSGDRGYTDPCVATSLKSPSQPQAPKDRKVPTRKAERSVSCIEVTPGD
RSWHQMVVRALSSQESKPEHQGLAEPENDQLPEEYQQPPPFAPGYC"
BASE COUNT 407 a 453 c 426 g 278 t
ORIGIN
1 ggggacagct acagcgaggg cctcggccat ccaagggtct cccaggtggc ccacaccttc
61 caccagcaga agccaattga gccgcgcagg gagctgctga cacagccctg caggcagaag
121 gatcccgcaa acgtggatta cgaggatctc ttcctctacc ccaacgcagt ggccgaggaa
181 gctgcctgcc cggtgtctgc ccctgaggag gcctccccaa agccagtcct gtgtcaccaa
241 tcaaaggaaa ggaagccgtc agcagagatg aacagaataa ccaccaagga agccacttcc
301 tcctgccccc caaaatcccc tcttggagag acccgccaga aactctggag gagcctcaaa
361 atgctccccg agagaggcca gagggtccgg cagcagctaa aaagccacct cgccactgtg
421 aacttgtcgt cactcttgga tgtccggaga tccacggtga tctcaggccc tgggaccgga
481 aaaggcagcc aagatcactc aggggatccc acctcggggg acagaggcta cacggatccc
541 tgtgtggcca catctctcaa aagcccctca cagccccagg caccaaaaga cagaaaggtc
601 cccaccagga aggccgagag gtcggtcagc tgcattgagg tgaccccagg ggacaggagt
661 tggcaccaaa tggtagtgag agccctatcc tcccaggagt ccaagccaga gcaccagggc
721 ttggcagagc ctgagaacga ccagctccca gaggagtacc aacaaccgcc accctttgcc
781 cctgggtact gctagagaac aggtccaccc tggctctggg actcgctgcc aggggctgcc
841 acactcctga atgccttaac atttcttcca tggccccaca ccatggcatc cgggggtctt
901 cgggaacccg ggaaatggaa taaagatgtt tttggggtct gttcctgcac tcacccatgg
961 ggtgagctgg ttattttagc aacaatcatc agagtgacgc tgatggtttg gggcaccagc
1021 tatacatcag ccccagtgcc agaccttcta ttcattattt tacgcctcag agcaaggccc
1081 tcagggaggg tcatcctcca tgttttgaag aagagactga ggttcagaga ggataagagg
1141 cgtgaccaag gccacagagc tatgggtgtc agcaccagga tttgaagcca ggtgaatccg
1201 agcccttttc ccatatcatc tgtttgttct gttgtctaaa agcacactgc aagccgggct
1261 cagtggctca tgcctgtagt cccagcactc tgtggggccg aggcaggcag atcgcttgag
1321 gtcaggagtt cgagaccagc ctggccaaca tggtgaaacc ccgtctatac taaaaaattc
1381 aaaaattacc cggacgtggt ggcgcatgcc tgtaattcca gctacttggg agcctgaggc
1441 gggagaattg cttgaacccg ggaggcagag gttgcagtga gccgagatcg catcactgca
1501 gtccagcctg gatgacagag tgagactcca tcccaaaaaa aaaaaaaaaa aaaaaaaaaa
1561 aaaa
//