LOCUS BC016825 1518 bp mRNA linear HUM 01-FEB-2005
DEFINITION Homo sapiens spire homolog 1 (Drosophila), mRNA (cDNA clone
IMAGE:4108430), complete cds.
ACCESSION BC016825
VERSION BC016825.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1518)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1518)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 32 Row: c Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1518
/db_xref="H-InvDB:HIT000037704"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4108430"
/tissue_type="Bone marrow, acute myelogenous leukemia"
/clone_lib="NIH_MGC_55"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1518
/gene="SPIRE1"
/gene_synonym="Spir-1"
/db_xref="GeneID:56907"
CDS 80..475
/gene="SPIRE1"
/gene_synonym="Spir-1"
/codon_start=1
/product="SPIRE1 protein"
/protein_id="AAH16825.1"
/db_xref="GeneID:56907"
/translation="MRLPSKPYSTLPIFSLGPSALQRGESSMRSEKPSTAHHRPLRSI
ARFSSKSKSMDKSDEELQFPKELMEDWSTMEVCVDCKKFISEIISSSRRSLVLANKRA
RLKRKTQSFYMSSPGPSEYCPSERTISEI"
BASE COUNT 412 a 325 c 352 g 429 t
ORIGIN
1 ggggaggttt tccttcttca cttggtctta tacctgtcag ttctgtaaga ggccggtgtg
61 ctcacagtgt tgcaaaaaga tgcggctgcc ctccaaacca tactccactc ttcctatctt
121 ttcattggga ccttctgctc tgcaaagagg ggaaagtagt atgaggtcag aaaaaccctc
181 cactgcccat catcggccac ttcggagcat tgccaggttc tcctcaaaat ctaagtctat
241 ggacaaatca gatgaagaac tccagtttcc caaagagttg atggaggact ggagcaccat
301 ggaggtgtgt gtggactgca agaagttcat ttcggaaatc atcagttcaa gccggcgcag
361 tctggtgttg gccaacaaaa gggcccgatt gaaaaggaaa acgcagtctt tctacatgtc
421 ctcgccaggc ccctcggagt actgcccttc agagaggacg atcagtgaga tctgagcctc
481 gtgcctttca gctgcttttg tgctacgagt cagcgtccgt gcgcgaggac actgagccgg
541 gctggctctc ctttctgtgg ttttatttaa tgggcttgaa tttgcattag atcagatttt
601 tgccgcatca cattgttcca cagactgaat gctgtgttcg tatcgattga tgaaacgtga
661 caggtccgcc aattgctcgt ttgcactgag agaggacaac agtttgaaac ttacttttgt
721 gtgtgtgtgg ctttggaagc cagtagctac ttccttagtt cagttcttta ctgttcctcg
781 aataatctcc tgactaaggc aaaaaaaaaa aaagcttctc ctacgagaat cagtctaaca
841 gagatgccga tgtcagcaca gccctaagca gtaagtcata ttggcatttc cacgtgactg
901 tgtttctatc ccgtgtacag agagatccag agccctacac tccacgacct gggggctcac
961 agcacagaac ctagaagcac ctgctgacac tcttcaactg atttttaaat gttgttgctt
1021 ggagataaaa attacataag ggactttttg cctgcattct agtgcaaaac atctgaagag
1081 ctgtacaccc acaagggtga ctatttcccc tgagtggccg tgttgtccca gtgccctggt
1141 tcagtgtctc ctgagtggat gacaggtctt cattctctat cttgaatgta ttatggttac
1201 taatagtttt ataatggagg tctaagaatt aaagttgtgt gggagtttca ggacaaagga
1261 aggctaaaag tttgtcaaga cgttgagcgt attttggtta cctatgagaa gggttgtgac
1321 agtgtacagt ggcagctgtt ggccacgctg cagaaatgag ctggagctca tgggttttca
1381 gctacatttt tcataacttt gtagtacatc catcttgagt aaattaagcc acaatttggt
1441 acctagggtc tcaaactaaa atttattttt ataaatgaat tttaaaagaa aaaaaaaaaa
1501 aaaaaaaaaa aaaaaaaa
//