LOCUS BC016756 962 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens glutathione peroxidase 2 (gastrointestinal), mRNA
(cDNA clone MGC:13627 IMAGE:3681457), complete cds.
ACCESSION BC016756
VERSION BC016756.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 962)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 962)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 19 Row: a Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32967606.
FEATURES Location/Qualifiers
source 1..962
/db_xref="H-InvDB:HIT000089053"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:13627 IMAGE:3681457"
/tissue_type="Bladder, carcinoma"
/clone_lib="NIH_MGC_53"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..962
/gene="GPX2"
/gene_synonym="GI-GPx"
/gene_synonym="GPRP"
/gene_synonym="GSHPx-2"
/gene_synonym="GSHPX-GI"
/db_xref="GeneID:2877"
/db_xref="HGNC:HGNC:4554"
/db_xref="MIM:138319"
CDS 34..606
/gene="GPX2"
/gene_synonym="GI-GPx"
/gene_synonym="GPRP"
/gene_synonym="GSHPx-2"
/gene_synonym="GSHPX-GI"
/codon_start=1
/transl_except=(pos:151..153,aa:Sec)
/product="glutathione peroxidase 2 (gastrointestinal)"
/protein_id="AAH16756.1"
/db_xref="GeneID:2877"
/db_xref="HGNC:HGNC:4554"
/db_xref="MIM:138319"
/translation="MAFIAKSFYDLSAISLDGEKVDFNTFRGRAVLIENVASLUGTTT
RDFTQLNELQCRFPRRLVVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGYQPTFTLV
QKCEVNGQNEHPVFAYLKDKLPYPYDDPFSLMTDPKLIIWSPVRRSDVAWNFEKFLIG
PEGEPFRRYSRTFPTINIEPDIKRLLKVAI"
BASE COUNT 228 a 279 c 232 g 223 t
ORIGIN
1 ggggtctctg cggggctcac tctgcgcttc accatggctt tcattgccaa gtccttctat
61 gacctcagtg ccatcagcct ggatggggag aaggtagatt tcaatacgtt ccggggcagg
121 gccgtgctga ttgagaatgt ggcttcgctc tgaggcacaa ccacccggga cttcacccag
181 ctcaacgagc tgcaatgccg ctttcccagg cgcctggtgg tccttggctt cccttgcaac
241 caatttggac atcaggagaa ctgtcagaat gaggagatcc tgaacagtct caagtatgtc
301 cgtcctgggg gtggatacca gcccaccttc acccttgtcc aaaaatgtga ggtgaatggg
361 cagaacgagc atcctgtctt cgcctacctg aaggacaagc tcccctaccc ttatgatgac
421 ccattttccc tcatgaccga tcccaagctc atcatttgga gccctgtgcg ccgctcagat
481 gtggcctgga actttgagaa gttcctcata gggccggagg gagagccctt ccgacgctac
541 agccgcacct tcccaaccat caacattgag cctgacatca agcgcctcct taaagttgcc
601 atatagatgt gaactgctca acacacagat ctcctactcc atccagtcct gaggagcctt
661 aggatgcagc atgccttcag gagacactgc tggacctcag cattcccttg atatcagtcc
721 ccttcactgc agagccttgc ctttcccctc tgcctgtttc cttttcctct cccaaccctc
781 tggttggtga ttcaacttgg gctccaagac ttgggtaagc tctgggcctt cacagaatga
841 tggcaccttc ctaaaccctc atgggtggtg tctgagaggc gtgaagggcc tggagccact
901 ctgctagaag agaccaataa agggcaggtg tggaaaaaaa aaaaaaaaaa aaaaaaaaaa
961 aa
//