LOCUS BC016713 1574 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens parvin, alpha, mRNA (cDNA clone MGC:24388
IMAGE:4065758), complete cds.
ACCESSION BC016713
VERSION BC016713.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1574)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1574)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 32 Row: p Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19923815.
FEATURES Location/Qualifiers
source 1..1574
/db_xref="H-InvDB:HIT000037648"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:24388 IMAGE:4065758"
/tissue_type="Brain, glioblastoma"
/clone_lib="NIH_MGC_57"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1574
/gene="PARVA"
/gene_synonym="FLJ10793"
/gene_synonym="FLJ12254"
/db_xref="GeneID:55742"
/db_xref="HGNC:HGNC:14652"
/db_xref="MIM:608120"
CDS 87..1205
/gene="PARVA"
/gene_synonym="FLJ10793"
/gene_synonym="FLJ12254"
/codon_start=1
/product="parvin, alpha"
/protein_id="AAH16713.1"
/db_xref="GeneID:55742"
/db_xref="HGNC:HGNC:14652"
/db_xref="MIM:608120"
/translation="MATSPQKSPSVPKSPTPKSPPSRKKDDSFLGKLGGTLARRKKAK
EVSELQEEGMNAINLPLSPIPFELDPEDTMLEENEVRTMVDPNSRSDPKLQELMKVLI
DWINDVLVGERIIVKDLAEDLYDGQVLQKLFEKLESEKLNVAEVTQSEIAQKQKLQTV
LEKINETLKLPPRSIKWNVDSVHAKSLVAILHLLVALSQYFRAPIRLPDHVSIQVVVV
QKREGILQSRQIQEEITGNTEALSGRHERDAFDTLFDHAPDKLNVVKKTLITFVNKHL
NKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLHSFFLTPDSFEQKVLNVSFAFELM
QDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTKYRNVE"
BASE COUNT 421 a 430 c 396 g 327 t
ORIGIN
1 gggagcctca gtcccgccgc cgcccgctgc gtccgcccag cgccagctcc gcgtcccgac
61 cggcccgcgg cagcctgcgc cgcgccatgg ccacctcccc gcagaagtcg ccttctgtcc
121 ccaagtctcc cactcccaag tcgcccccgt cccgcaagaa agatgattcc ttcttgggga
181 aactcggagg gaccctggcc cggaggaaga aagccaagga ggtgtccgag ctgcaggagg
241 agggaatgaa cgccatcaac ctgcccctca gcccaattcc ctttgagctg gaccccgagg
301 acacgatgct ggaggagaat gaggtgcgaa caatggtgga tccaaactca cgcagtgacc
361 ccaagcttca agaactgatg aaggtattaa ttgactggat taatgatgtg ttggttggag
421 aaagaatcat tgtgaaagac ctagctgaag atttgtatga tggacaagtc ctgcagaagc
481 ttttcgagaa actggagagt gagaagctaa atgtggctga ggtcacccag tcagagattg
541 ctcagaagca aaaactgcag actgtcctgg agaagatcaa tgaaaccctg aaacttcctc
601 ccaggagcat caagtggaat gtggattctg ttcatgccaa gagcctggtg gccatcttac
661 acctgctcgt tgctctgtct cagtatttcc gcgcaccaat tcgactccca gaccatgttt
721 ccatccaagt ggttgtggtc cagaaacgag aaggaatcct ccagtctcgg caaatccaag
781 aggaaataac tggtaacaca gaggctcttt ccgggaggca tgaacgtgat gcctttgaca
841 ccttgttcga ccatgcccca gacaagctga atgtggtgaa aaagacactc atcactttcg
901 tgaacaagca cctgaataaa ctgaacctgg aggtcacaga actggaaacc cagtttgcag
961 atggggtgta cctggtgctg ctcatggggc tcctggaggg ctactttgtg cccctgcaca
1021 gcttcttcct gaccccggac agctttgaac agaaggtctt gaatgtctcc tttgcctttg
1081 agctcatgca agatggaggg ttggaaaagc caaaaccgcg gccagaagac atagtcaact
1141 gtgacctgaa atctacacta cgagtgttgt acaacctctt caccaagtac cgtaacgtgg
1201 agtgaggggc tgccctgggc ccaccactgc ccaagagttc ttgctgttgg cgtactggac
1261 cctcctccga actgccttac cctgcttatt cctgtctctt gcactgtgct ctcccacaag
1321 tccagctgca acccagagat agtggaaact gaaattagga aggaaatcat caataactca
1381 gtgggctgac ccatccctcc caggcgctgg ggaccaacct agcaatgaag gttgggaagg
1441 ttgttccctt cccggtgcca ggtccagatt tccctccatg atttgggaac cagcttaggc
1501 aaaagagtcc ccacaagatg aaaataaaga tcctagttac catccaaaaa aaaaaaaaaa
1561 aaaaaaaaaa aaaa
//