LOCUS BC016698 1434 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromatin modifying protein 5, mRNA (cDNA clone
MGC:22725 IMAGE:4094210), complete cds.
ACCESSION BC016698
VERSION BC016698.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1434)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1434)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 32 Row: i Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20127557.
FEATURES Location/Qualifiers
source 1..1434
/db_xref="H-InvDB:HIT000037636"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22725 IMAGE:4094210"
/tissue_type="Brain, glioblastoma"
/clone_lib="NIH_MGC_57"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1434
/gene="CHMP5"
/gene_synonym="CGI-34"
/gene_synonym="HSPC177"
/gene_synonym="PNAS-2"
/db_xref="GeneID:51510"
/db_xref="HGNC:HGNC:26942"
CDS 80..739
/gene="CHMP5"
/gene_synonym="CGI-34"
/gene_synonym="HSPC177"
/gene_synonym="PNAS-2"
/codon_start=1
/product="chromatin modifying protein 5"
/protein_id="AAH16698.1"
/db_xref="GeneID:51510"
/db_xref="HGNC:HGNC:26942"
/translation="MNRLFGKAKPKAPPPSLTGCIGTVDSRAESIDKKISRLDAELVK
YKDQIKKMREGPAKNMVKQKALRVLKQKRMYEQQRDNLAQQSFNMEQANYTIQSLKDT
KTTVDAMKLGVKEMKKAYKQVKIDQIEDLQDQLEDMMEDANEIQEALSRSYGTPELDE
DDLEAELDALGDELLADEDSSYLDEAASAPAIPEGVPTDTKNKDGVLVDEFGLPQIPA
S"
BASE COUNT 466 a 229 c 310 g 429 t
ORIGIN
1 ggggaagtcg aggcgggagt gactctgctt ccgtttctgg ttttgctcta gtgtttgggt
61 ttcttcgcgg ctgctcaaga tgaaccgact cttcgggaaa gcgaaaccca aggctccgcc
121 gcccagcctg actggctgca ttggcacggt ggacagtaga gcagaatcca ttgacaagaa
181 gatttctcga ttggatgctg agctagtgaa gtataaggat cagatcaaga agatgagaga
241 gggtcctgca aagaatatgg tcaagcagaa agccttgcga gttttaaagc aaaagaggat
301 gtatgagcag cagcgggaca atcttgccca acagtcattc aacatggaac aagccaatta
361 taccatccag tctttgaagg acaccaagac cacggttgat gctatgaaac tgggagtaaa
421 ggaaatgaag aaggcataca agcaagtgaa gatcgaccag attgaggatt tacaagacca
481 gctagaggat atgatggaag atgcaaatga aatccaagaa gcactgagtc gcagttatgg
541 caccccagaa ctggatgaag atgatttaga agcagagttg gatgcactag gtgatgagct
601 tctggctgat gaagacagtt cttatttgga tgaggcagca tctgcacctg caattccaga
661 aggtgttccc actgatacaa aaaacaagga tggagttctg gtggatgaat ttggattgcc
721 acagatccct gcttcataga tttgcatcat tcaagcatat cttgtaaaac aaacacatat
781 tatgggacta ggaaatattt atctttccaa atttgccata acagatttag gtttctttcc
841 tttctttgaa ggaaagttta attacattgc tcttttattt tttccattaa gagactcatt
901 gcttgggaaa tgctttcttc gtactaaaat ttgattcctt tttttcttat gaaaaacgaa
961 ctcagtttaa aagtattttt agctcgtatg acttgttttc attcattaat aataatttga
1021 aataaaacta aggaaatgga atcttaaaag tctatgacag tgtaactcta cagtctcaaa
1081 atgacctgat aaattgataa gacaaagatg agattattgg ggctgttcat attatgattc
1141 agaatcattt tctattgtgg tattataggt tggttaaagt gatggccttt ttgatgggtt
1201 ttgttgtgtc ttgtgaacaa gtcgttactg tgtccattat tggaatggaa ttatcactac
1261 tgtatcatga gtgggtattt tgattctatg gttccctcag tattacatct tgacttgtaa
1321 tcaattatga atatttcttg atatttaatg tataggacat ttatttatac tcaataaata
1381 tttttcaaaa ggaaaaaaaa aaaaatcaaa aaaaaaaaaa aaaaaaaaaa aaaa
//