LOCUS BC016683 2283 bp mRNA linear HUM 15-SEP-2004
DEFINITION Homo sapiens chromosome X open reading frame 39, mRNA (cDNA clone
IMAGE:4389250), partial cds.
ACCESSION BC016683
VERSION BC016683.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2283)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2283)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (31-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 26 Row: p Column: 9.
FEATURES Location/Qualifiers
source 1..2283
/db_xref="H-InvDB:HIT000089025"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4389250"
/tissue_type="Bone, osteosarcoma"
/clone_lib="NIH_MGC_86"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2283
/gene="CXorf39"
/db_xref="GeneID:139231"
CDS <1..569
/gene="CXorf39"
/codon_start=3
/product="CXorf39 protein"
/protein_id="AAH16683.1"
/db_xref="GeneID:139231"
/translation="SIPSSPCLLPKKKNKHRNLDELPWSAMTNDEQVEYIEYLSRKVS
TEMGLREQLDIIKIIDPSAQISPTDSEFIIELNCLTDEKLKQVRNYIKEHSPRQRPAR
EAWKRSNFSCASTSGVSGASASASSSSASMKRSKQRKLQQKAFRKRQLKEQRQARKER
LSGLFLNEEVLSLKVTEEDHEADVDVLM"
BASE COUNT 703 a 367 c 468 g 745 t
ORIGIN
1 ccagtattcc aagttcacct tgcctgcttc ctaaaaagaa aaacaagcac cggaatttag
61 atgaactccc ttggagtgca atgacaaatg atgagcaggt ggaatatatt gagtatctga
121 gtcggaaagt gagtactgag atgggtcttc gggagcaact tgatattatt aagatcattg
181 atccttctgc tcaaatctcc cctacagaca gtgagtttat tattgaactt aactgtctca
241 cagatgaaaa actgaagcag gtcagaaact atatcaagga acatagccct cgccaacggc
301 ctgcaagaga ggcctggaag agaagcaact ttagttgtgc aagcaccagt ggagtgagcg
361 gtgccagtgc cagcgccagc agcagcagtg ccagcatgaa gcgatccaag cagcggaagt
421 tacagcagaa ggccttccgc aagaggcagc tgaaggagca gaggcaggcc cggaaggaga
481 ggctcagtgg gctcttcctt aacgaagagg tgctgtcctt gaaagtgact gaggaagacc
541 atgaagcaga tgttgatgtt ttgatgtaat aagggtgaat ttatcaacgt tctttgtgag
601 cattaaaata ctccatcctt atgggtttac atgcatcttg accaaaattt tggttagggc
661 tgtgctgatg taccattaat aatttaagcc agtggttctt ggcaggtgat cccaagacct
721 gcagcttcag catcacttga gaagttgtta ggaatgcata ctagtgggcc ccgcccccag
781 acatagtgaa tcagaaacca acagggaggc gcctagcatt gtttttttaa caagtgctgg
841 gttattctga tgcacagtct agtttaagaa ccactacttt gggtaaacgt tttgactgtt
901 taaagtttat ggcggtgaag tgggcgtctt caaagactag tacttacaca gtttagaaga
961 tttcaaggta ctgctgacag tagtttatta tgtcagtata catacatgtg tagagatcat
1021 aatttagttc ccttcttaat gttacaattt cttagtttac ttttcctaaa gggccatagc
1081 ataattcttg attcctggtg gaaatctttt ctgaggtgtg ggggtgggca aggtgtggat
1141 tgctgtttac gatagtgcct tcattagttt tagttctgtc tgttttcatt cattattgac
1201 tcaaaggtat tagaacaggc ccttatcttt ttcctattag atttattttt gttttttact
1261 ttatgtaagt tcagaatcct tttttaagtg atgactactg atgaaataat gttactagta
1321 gctgaatttt agacttgatg ctatgttgat taatatttaa atggtgaaag taattaggca
1381 aaataagcaa ttctgctttt ctgttgcttt cagaattttt aggctgtaaa attgtctcag
1441 ggaggaagtc agtctatatc tctctcaagt tcttattgta ggtcattttt ttttcagcac
1501 agctctaatt tttaaatatt tggtataaca gcttctggca tgtgacctag ttaatgttga
1561 aaattaactg atgaaaaccc ttgtagatct gctaaacttc tctataaatt gctagaaata
1621 tacagagcaa tgagatatag aaaacacctt agcttgttgg ttattaatag agctctaatt
1681 ttaactgtga aatcatggag tttctttaaa tgttttccta gagtgtttgt tatcatgaac
1741 attagaaata gcattattcc ttttcttcta ccacatgtct tgaacattca catgggttaa
1801 agaagatgga aactgatact actgacaatc aagctgcttt ctgactttca taattttctt
1861 tatattgtgg atagcatttt gaaggtgacc gtgattctgt aggaagagct gtaatcaata
1921 tttttcaaac tctaagagta cagaggttag taagatttct ttttttttta ctttttgtta
1981 cgtcaagtag cttattaaga aaaagattca tgacttaaat tcttaattct cagttgatac
2041 aaaggcttat aatcatgtgt tttaaaattt tgatttcatt ttcgttcctt gaaggttaaa
2101 gaatggaaac tggggataaa aattaataca ctgcagcttt gccaaggtct gtgatatggt
2161 tgtaaccttt taaagactac taaagtcata atttgaaatt tttactaaaa taaaacatat
2221 gtgtctatgg ttttcaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2281 aaa
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