LOCUS BC016663 2810 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ubiquitin specific peptidase 33, mRNA (cDNA clone
MGC:16868 IMAGE:3874822), complete cds.
ACCESSION BC016663
VERSION BC016663.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2810)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2810)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 13 Row: p Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42516560.
FEATURES Location/Qualifiers
source 1..2810
/db_xref="H-InvDB:HIT000037621"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:16868 IMAGE:3874822"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2810
/gene="USP33"
/gene_synonym="KIAA1097"
/gene_synonym="MGC16868"
/gene_synonym="VDU1"
/db_xref="GeneID:23032"
/db_xref="HGNC:HGNC:20059"
CDS 229..2715
/gene="USP33"
/gene_synonym="KIAA1097"
/gene_synonym="MGC16868"
/gene_synonym="VDU1"
/codon_start=1
/product="ubiquitin specific peptidase 33"
/protein_id="AAH16663.1"
/db_xref="GeneID:23032"
/db_xref="HGNC:HGNC:20059"
/translation="MTGSNSHITILTLKVLPHFESLGKQEKIPNKMSAFRNHCPHLDS
VGEITKEDLIQKSLGTCQDCKVQGPNLWACLENRCSYVGCGESQVDHSTIHSQETKHY
LTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQDFKIPSNTTLKT
PLVAVFDDLDIEADEEDELRARGLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGG
LARTDKKPAICKSYLKLMTELWHKSRPGSVVPTTLFQGIKTVNPTFRGYSQQDAQEFL
RCLMDLLHEELKEQVMEVEEDPQTITTEETMEEDKSQSDVDFQSCESCSNSDRAENEN
GSRCFSEDNNETTMLIQDDENNSEMSKDWQKEKMCNKINKVNSEGEFDKDRDSISETV
DLNNQETVKVQIHSRASEYITDVHSNDLSTPQILPSNEGVNPRLSASPPKSGNLWPGL
APPHKKAQSASPKRKKQHKKYRSVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLP
IPGKEDLAKLHSSSHPTSIVKAGSCGEAYAPQGWIAFFMEYVKSWFWGPVVTLQDCLA
AFFARDELKGDNMYSCEKCKKLRNGVKFCKVQNFPEILCIHLKRFRHELMFSTKISTH
VSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTASSGHYIAYCRNNLNNLWYEFD
DQSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIMEPSLLQFYISRQWLN
KFKTFAEPGPISNNDFLCIHGGVPPRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNH
LYICHTCQIEAEKIEKRRKTELEIFIRVKK"
BASE COUNT 958 a 507 c 595 g 750 t
ORIGIN
1 gagagctgag aaggaaaaga ggagcttgcg gaggtgcggc tgcaggccgt tgttggtcga
61 gctggcgggt cccgcgggcc aggccgtgga gagctcctga aggaagcact aaacatggaa
121 aggaacaacc ggtaccagcc actgcaaaaa catgccaaat tgtaaagacc atcgatgtta
181 ggaagaaact gcctcaacta atgagcaaaa taaccagcta acatcgtaat gacaggatca
241 aattcacaca taacgatatt aaccttaaag gtgttacctc attttgaaag tcttgggaaa
301 caggaaaaaa ttcctaacaa aatgtcagct tttcgaaatc attgtccaca tttggattca
361 gttggtgaaa taacaaaaga agatttgata caaaaatccc ttggtacttg tcaggattgt
421 aaagtccaag gaccaaatct ttgggcatgt ctggagaata gatgttcata tgttggctgt
481 ggtgaatcac aagtagatca cagcaccata cattctcagg agacaaagca ttatctaact
541 gtgaacctta ccactcttcg agtatggtgt tatgcttgca gcaaagaagt atttttggat
601 aggaaattag gaactcagcc ttcattgcct catgtaagac aacctcacca aatacaagaa
661 aacagtgtcc aggattttaa aatacccagt aatacaacat taaaaactcc tctggttgcc
721 gtatttgatg atctggatat agaagcggat gaagaagatg aacttagggc cagaggtctt
781 acaggtttga aaaatattgg aaatacttgt tacatgaatg cagctttgca ggctctttct
841 aattgcccac ctttgacaca gttttttctt gattgtggag gactagctcg aacagataag
901 aaacctgcca tttgtaaaag ttatctcaaa ctaatgacag agctgtggca taaaagcagg
961 ccaggatctg ttgtgcctac tactctgttt caaggaatta aaactgtaaa tccaacattt
1021 cgggggtatt ctcagcagga tgctcaagaa ttccttcgat gtttaatgga tttgcttcat
1081 gaagaattga aagagcaagt catggaagta gaagaagatc cgcaaaccat aaccactgag
1141 gagacaatgg aagaagacaa gagccagtcg gatgtagatt ttcagtcttg tgaatcttgt
1201 agcaacagtg atagagcaga aaatgaaaat ggctctagat gcttttctga agataataat
1261 gaaacaacaa tgttaattca ggatgatgaa aacaattcag aaatgtcaaa ggattggcaa
1321 aaagagaaga tgtgcaataa gattaataaa gtaaattctg aaggcgaatt tgataaagat
1381 agagactcta tatctgaaac agtcgactta aacaaccagg aaactgtcaa agtgcaaata
1441 cacagcagag cttcagaata tatcactgat gtccattcga atgacctgtc tacaccacag
1501 atccttccat caaatgaagg tgttaatcca cgtttatcgg caagccctcc taaatcaggc
1561 aatttgtggc caggattggc accaccacac aaaaaagctc agtctgcatc tccaaagaga
1621 aaaaaacagc acaagaaata cagaagtgtt atttcagaca tatttgatgg aacaatcatt
1681 agttcagtgc agtgtctgac ttgtgacagg gtgtctgtaa ccctcgagac ctttcaagat
1741 ctgtccttgc caattcctgg caaggaagac cttgctaagc tgcattcatc aagtcatcca
1801 acttctatag tcaaagcagg atcatgtggc gaagcatatg ctccacaagg gtggatagct
1861 tttttcatgg aatatgtgaa gagctggttt tggggtccag tagtaacctt gcaagattgt
1921 cttgctgcct tctttgccag agatgaacta aaaggtgaca atatgtacag ttgtgaaaaa
1981 tgcaaaaagt tgagaaatgg agtgaagttt tgtaaagtac aaaactttcc tgagattttg
2041 tgcatccacc ttaaaagatt cagacatgaa ctaatgtttt ccaccaaaat cagtacccat
2101 gtttcatttc cgctagaagg cttggatctt cagccatttc ttgctaagga tagtccagct
2161 caaattgtga catatgatct tctgtcagtc atttgccatc atggaactgc aagtagtgga
2221 cactatatag cctactgccg aaacaatcta aataatctct ggtatgaatt tgatgatcag
2281 agtgtcactg aagtttcaga atctactgta caaaatgcag aagcttacgt tcttttctat
2341 aggaagagca gcgaagaggc acaaaaagag aggagaagga tatcaaattt attgaacata
2401 atggaaccaa gcctccttca gttttatatt tctcgacagt ggcttaataa atttaagacc
2461 tttgccgaac ctggccctat ttcaaataat gactttcttt gtattcatgg aggtgttcct
2521 ccaagaaaag ctggttatat tgaagacctg gttttgatgc tgcctcagaa catttgggat
2581 aacctatata gcaggtatgg tggaggacca gctgtcaacc atctgtacat ttgtcatact
2641 tgccaaattg aggcggagaa aattgaaaaa agaagaaaaa ctgaattgga aatttttatt
2701 cgggtaaaaa agtgatgctt ttcaaattga tctaggataa agatgaagac ctgacaatta
2761 tcagagttat atgatattaa taaaatgatt agatgaaaaa aaaaaaaaaa
//