LOCUS BC016622 3121 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ring finger protein 10, mRNA (cDNA clone MGC:17738
IMAGE:3874214), complete cds.
ACCESSION BC016622
VERSION BC016622.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3121)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3121)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 13 Row: n Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34452680.
FEATURES Location/Qualifiers
source 1..3121
/db_xref="H-InvDB:HIT000037603"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17738 IMAGE:3874214"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3121
/gene="RNF10"
/gene_synonym="KIAA0262"
/gene_synonym="RIE2"
/db_xref="GeneID:9921"
/db_xref="HGNC:HGNC:10055"
CDS 448..2883
/gene="RNF10"
/gene_synonym="KIAA0262"
/gene_synonym="RIE2"
/codon_start=1
/product="ring finger protein 10"
/protein_id="AAH16622.1"
/db_xref="GeneID:9921"
/db_xref="HGNC:HGNC:10055"
/translation="MPLSSPNAAATASDMDKNSGSNSSSASSGSSKGQQPPRSASAGP
AGESKPKSDGKNSSGSKRYNRKRELSYPKNESFNNQSRRSSSQKSKTFNKMPPQRGGG
SSKLFSSSFNGGRRDEVAEAQRAEFSPAQFSGPKKINLNHLLNFTFEPRGQTGHFEGS
GHGSWGKRNKWGHKPFNKELFLQANCQFVVSEDQDYTAHFADPDTLVNWDFVEQVRIC
SHEVPSCPICLYPPTAAKITRCGHIFCWACILHYLSLSEKTWSKCPICYSSVHKKDLK
SVVATESHQYVVGDTITMQLMKREKGVLVALPKSKWMNVDHPIHLGDEQHSQYSKLLL
ASKEQVLHRVVLEEKVALEQQLAEEKHTPESCFIEAAIQELKTREEALSGLAGSRREV
TGVVAALEQLVLMAPLAKESVFQPRKGVLEYLSAFDEETTEVCSLDTPSRPLALPLVE
EEEAVSEPEPEGLPEACDDLELADDNLKEGTICTESSQQEPITKSGFTRLSSSPCYYF
YQAEDGQHMFLHPVNVRCLVREYGSLERSPEKISATVVEIAGYSMSEDVRQRHRYLSH
LPLTCEFSICELALQPPVVSKETLEMFSDDIEKRKRQRQKKAREERRRERRIEIEENK
KQGKYPEVHIPLENLQQFPAFNSYTCSSDSALGPTSTEGHGALSISPLSRSPGSHADF
LLTPLSPTASQGSPSFCVGSLEEDSPFPSFAQMLRVGKAKADVWPKTAPKKDENSLVP
PAPVDSDGESDNSDRVPVPSFQNSFSQAIEAAFMKLDTPATSDPLSEEKGGKKRKKQK
QKLLFSTSVVHTK"
BASE COUNT 755 a 871 c 810 g 685 t
ORIGIN
1 cgactcgtcg ccattcccgg agcaggtcgg cctcggccca ggggcgagta tccgttgctg
61 tgtcggagac actagtcccc gacaccgaga cagccagccc tctcccctgc ctcgcggcgg
121 gagagcgtgt ccggccggcc ggccggcggg gctcgcgcaa cctccctcgc ctccccttcc
181 cccgcagcct ccgccccgcc aggcccggcc cggactcccg agccccggcc tcctcgtcct
241 cggtcgccgc tgccgccggg cttaacagcc ccgtccgccg cttctcttcc tagtttgaga
301 agccaaggaa ggaaacaggg aaaaatgtcg ccatgaaggc cgagaaccgc tgccgccgcc
361 gacccccgcc ggccctgaac gccatgagcc tgggtccccg ccgcgcccgc tccgctccga
421 ctgccgtcgc cgccgaggcc cccgttgatg ccgctgagct cccccaacgc cgccgccacc
481 gcctccgaca tggacaagaa cagcggctcc aacagctcct ccgcctcttc gggcagcagc
541 aaagggcaac agccgccccg ctccgcctcg gcggggccag ccggcgagtc taaacccaag
601 agcgatggaa agaactccag tggatccaag cgttataatc gcaaacgtga actttcctac
661 cccaaaaatg aaagttttaa caaccagtcc cgtcgctcca gttcacagaa aagcaagact
721 tttaacaaga tgcctcctca aaggggcggc ggcagcagca aactctttag ctcttctttt
781 aatggtggaa gacgagatga ggtagcagag gctcaacggg cagagtttag ccctgcccag
841 ttctctggtc ctaagaagat caacctgaac cacttgttga atttcacttt tgaaccccgt
901 ggccagacgg gtcactttga aggcagtgga catggtagct ggggaaagag gaacaagtgg
961 ggacataagc cttttaacaa ggaactcttt ttacaggcca actgccaatt tgtggtgtct
1021 gaagaccaag actacacagc tcattttgct gatcctgata cattagttaa ctgggacttt
1081 gtggaacaag tgcgcatttg tagccatgaa gtgccatctt gcccaatatg cctctatcca
1141 cctactgcag ccaagataac ccgttgtgga cacatcttct gctgggcatg catcctgcac
1201 tatctttcac tgagtgagaa gacgtggagt aaatgtccca tctgttacag ttctgtgcat
1261 aagaaggatc tcaagagtgt tgttgccaca gagtcacatc agtatgttgt tggtgatacc
1321 attacgatgc agctgatgaa gagggagaaa ggggtgttgg tggctttgcc caaatccaaa
1381 tggatgaatg tagaccatcc cattcatcta ggagatgaac agcacagcca gtactccaag
1441 ttgctgctgg cctctaagga gcaggtgctg caccgggtag ttctggagga gaaagtagca
1501 ctagagcagc agctggcaga ggagaagcac actcccgagt cctgctttat tgaggcagct
1561 atccaggagc tcaagactcg ggaagaggct ctgtcgggat tggccggaag cagaagggag
1621 gtcactggtg ttgtggctgc tctggaacaa ctggtgctga tggctccctt ggcgaaggag
1681 tctgtttttc aacccaggaa gggtgtgctg gagtatctgt ctgccttcga tgaagaaacc
1741 acggaagttt gttctctgga cactccttct agacctcttg ctctccctct ggtagaagag
1801 gaggaagcag tgtctgaacc agagcctgag gggttgccag aggcctgtga tgacttggag
1861 ttagcagatg acaatcttaa agaggggacc atttgcactg agtccagcca gcaggaaccc
1921 atcaccaagt caggcttcac acgcctcagc agctctcctt gttactactt ttaccaagcg
1981 gaagatggac agcatatgtt cctgcaccct gtgaatgtgc gctgcctcgt gcgggagtac
2041 ggcagcctgg agaggagccc cgagaagatc tcagcaactg tggtggagat tgctggctac
2101 tccatgtctg aggatgttcg acagcgtcac agatatctct ctcacttgcc actcacctgt
2161 gagttcagca tctgtgaact ggctttgcaa cctcctgtgg tctctaagga aaccctagag
2221 atgttctcag atgacattga gaagaggaaa cgtcagcgcc aaaagaaggc tcgggaggaa
2281 cgccgccgag agcgcaggat tgagatagag gagaacaaga aacagggcaa gtacccagaa
2341 gtccacattc ccctcgagaa tctacagcag tttcctgcct tcaattctta tacctgctcc
2401 tctgattctg ctttgggtcc caccagcacc gagggccatg gggccctctc catttctcct
2461 ctcagcagaa gtccaggttc ccatgcagac tttctgctga cccctctgtc acccactgcc
2521 agtcagggca gtccctcatt ctgcgttggg agtctggaag aagactctcc cttcccttcc
2581 tttgcccaga tgctgagggt tggaaaagca aaagcagatg tgtggcccaa aactgctcca
2641 aagaaagatg agaacagctt agttcctcct gcccctgtgg acagcgacgg ggagagtgat
2701 aattcagacc gtgttcctgt gcccagtttt caaaattcct tcagccaagc tattgaagca
2761 gccttcatga aactggacac accagctact tcagatcccc tctctgaaga gaaaggagga
2821 aagaaaagaa aaaaacagaa acagaagctc ctgttcagca cctcagtcgt ccacaccaag
2881 tgacactact ggcccaggct accttctcca tctggttttt gtttttgttt ttttttcccc
2941 catgcttttg tttggctgct gtaattttta agtatttgag tttgaacaga ttagctctgg
3001 ggggaggggg tttccacaat gtgaggggga accaagaaaa ttttaaatac agtgtatttt
3061 ccagcttcct gtctttacac caaaataaag tattgacaca agagaaaaaa aaaaaaaaaa
3121 a
//