LOCUS BC016613 2245 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens chromosome 16 open reading frame 11, mRNA (cDNA clone
MGC:9566 IMAGE:3874510), complete cds.
ACCESSION BC016613
VERSION BC016613.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2245)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2245)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 13 Row: o Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21687187.
FEATURES Location/Qualifiers
source 1..2245
/db_xref="H-InvDB:HIT000037597"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9566 IMAGE:3874510"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2245
/gene="C16orf11"
/db_xref="GeneID:146325"
/db_xref="HGNC:HGNC:14139"
CDS 280..1995
/gene="C16orf11"
/codon_start=1
/product="chromosome 16 open reading frame 11"
/protein_id="AAH16613.1"
/db_xref="GeneID:146325"
/db_xref="HGNC:HGNC:14139"
/translation="MSREAGSCRVGTGARARSRKPKKPHYIPRPWGKPYNYKCFQCPF
TCLEKSHLYNHMKYSLCKDSLSLLLDSPDWACRRGSTTPRPHAPTPDRPGESDPGRQP
QGARPTGAAPAPDLVVADIHSLHCGGGPKSRAKGSPGPPPPVARATRKGPGPSGLLPE
SWKPGMGGDPRGVGAGDMASAGPEGSVPCYPPPAPGEFPEAHSLHLSLLGVNYPLSPG
LFSYLGPSLAAAAHVPFLASASPLLPPATAFPAVQPPQRPTPAPRLYYPLLLEHTLGL
PAGKAALAKAPVSPRSPSGTPAPGLLKVPVPGLGPWPRVTPRDPGQEGELERAAQSDP
RRRLSLGSRLELPKASPSLTRFCSRSSLPTGSSVMLWPEDGDPGGPETPGPEGPLPLQ
PRGPVPGSPEHVGEDLTRALGDYARVEQRLGQLGPAGGLAPRPLREQLGKIRLELLTI
HQALEQAVRPPDAPLDLSVKRAPAKGPQALGEAWGRPELGPVLTGGTPEPPGMLGPAA
PQPFSGHTTKCEADSSVPPPGLPLAAPDDPVIPGSGWGTCVATRSSQTPEAVCGLQSP
QGAEV"
BASE COUNT 360 a 852 c 719 g 314 t
ORIGIN
1 gggacgcggg cggcggcgga ggctgcggga gtcgctgccg ctcgagggac cgcggacccg
61 ggaggtccgg ctcccggcgc cgggcctcag tttcccccac gggagccgca tcccaccccc
121 agagccccag cgcgtccgcg gggtccgagt cgcggccggc gcggggcggg gaggggcggg
181 aagtttgcgc cctacacgcg gcctcgcaga cttggcggct ccgctcccgg ccgggagcag
241 gtggccatgg tgcccggccc tgcctcatag caggctgcca tgtcgcggga ggcgggctca
301 tgccgcgtgg gcacaggggc gagggcgcgg tctcggaagc ccaagaagcc acactacatc
361 ccgcggccct ggggcaaacc ctacaactac aaatgcttcc agtgcccctt cacctgcctg
421 gagaagtcac acctctacaa ccacatgaag tacagcctct gcaaggactc cctgtccctg
481 ctgctagact ccccagactg ggcgtgccgc cgtggctcca ccacgcctag gccccacgca
541 cccaccccag accgccctgg ggagtccgac cccggcaggc aaccccaggg agcacggccc
601 acaggtgctg cccccgcgcc tgacctcgtg gtcgccgaca tccactccct gcactgtggc
661 ggaggcccca agtccagggc caaggggtcc ccagggccac caccccctgt ggctagggcc
721 acccggaagg gtcccggccc cagtgggctc ctgcctgagt cgtggaagcc ggggatggga
781 ggggacccaa ggggcgtggg tgcgggggac atggcctcag caggccctga gggcagcgtc
841 ccctgctatc ccccgcctgc cccaggggag ttccctgagg cccacagcct ccacctgtct
901 ctgctgggcg tcaactaccc gctcagcccc ggcctcttct cctacttggg gccctcactg
961 gccgctgcag cccatgtgcc cttcctggcc tcggccagcc ccctgctgcc cccggccacg
1021 gccttcccag ccgtgcagcc ccctcagcgc cccaccccgg ccccccgcct gtactacccg
1081 ctgcttctgg agcacactct ggggctgcca gcaggcaaag ctgcccttgc caaggcccct
1141 gtctccccca ggagcccctc tgggactccg gctcctggcc tgctgaaggt gccagttcca
1201 gggctggggc cctggccccg agtcaccccc agggacccag ggcaggaggg ggagctggag
1261 cgggcagccc agagtgaccc caggaggagg ctgtccctgg gaagcaggct ggagcttccg
1321 aaggcatccc ccagcctgac aaggttctgt tcccggagca gcctgcccac cggctcctct
1381 gtgatgctgt ggcctgagga cggggatcca ggcggccctg agacccccgg ccctgagggc
1441 cccctccccc tgcagccacg gggcccagtg ccaggaagcc cggagcatgt gggcgaggac
1501 ctgacccgag ccctcggtga ctacgccagg gtggagcagc gcctgggaca gttggggccc
1561 gcggggggcc tggccccgag acccctgcgg gagcagctgg gcaagatccg cctggagctg
1621 ctcaccattc accaggcgct ggagcaggcc gtgaggccgc cagacgcacc cctcgacctc
1681 tctgtgaaac gtgcgcccgc caaggggccc caggctcttg gagaggcgtg ggggcggccc
1741 gagctgggtc ccgtgttgac cgggggcacc cccgagccac ccggcatgct gggccctgca
1801 gcgccccaac ccttctctgg ccacaccacc aagtgtgagg ccgactccag cgtcccaccc
1861 ccagggctcc ccctcgcagc cccagatgac cctgtcattc ctggcagtgg ctggggcacc
1921 tgtgttgcga cgaggagttc ccagacccct gaggctgtct gtggcctgca gagcccccag
1981 ggcgccgagg tctgacctgc agcgcctgag gtccgactgt ctctgcctgc agcatgccgg
2041 cccctctcct gcagcccctg cccctcacct gcctgggacc tgccccgcct ccgcatgcat
2101 gtggatagac ccccacgggc cgtggccaac gcttgtccct ggggccacac agggacactg
2161 gaggtcacag ttatttattg atcacaattg tggacattaa aacagaaact gttcacaaaa
2221 aaaaaaaaaa aaaaaaaaaa aaaaa
//