LOCUS BC016582 2811 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens polypyrimidine tract binding protein 2, mRNA (cDNA clone MGC:9393 IMAGE:3872881), complete cds. ACCESSION BC016582 VERSION BC016582.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2811) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2811) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (31-OCT-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Sep 16, 2003 this sequence version replaced BC016582.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 13 Row: m Column: 9 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 10863996. FEATURES Location/Qualifiers source 1..2811 /db_xref="H-InvDB:HIT000037595" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:9393 IMAGE:3872881" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2811 /gene="PTBP2" /gene_synonym="brPTB" /gene_synonym="MIBP" /gene_synonym="nPTB" /gene_synonym="nPTB5" /gene_synonym="nPTB6" /gene_synonym="nPTB7" /gene_synonym="nPTB8" /gene_synonym="PTB" /gene_synonym="PTBLP" /db_xref="GeneID:58155" /db_xref="HGNC:HGNC:17662" /db_xref="MIM:608449" CDS 30..1628 /gene="PTBP2" /gene_synonym="brPTB" /gene_synonym="MIBP" /gene_synonym="nPTB" /gene_synonym="nPTB5" /gene_synonym="nPTB6" /gene_synonym="nPTB7" /gene_synonym="nPTB8" /gene_synonym="PTB" /gene_synonym="PTBLP" /codon_start=1 /product="polypyrimidine tract binding protein 2" /protein_id="AAH16582.1" /db_xref="GeneID:58155" /db_xref="HGNC:HGNC:17662" /db_xref="MIM:608449" /translation="MDGIVTEVAVGVKRGSDELLSGSVLSSPNSNMSSMVVTANGNDS KKFKGEDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELA TEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNTLNQRAQAVLQAVTAVQTAN TPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQ FQALLQYGDPVNAQQAKLALDGQNIYNACCTLRIDFSKLVNLNVKYNNDKSRDYTRPD LPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLAIPNAAAAAAAAAAGRVGMPGVSA GGNTVLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAM NHLNGQKMYGKIIRVTLSKHQTVQLPREGLDDQGLTKDFGNSPLHRFKKPGSKNFQNI FPPSATLHLSNIPPSVAEEDLRTLFANTGGTVKAFKFFQRDHKMALLQMATVEEAIQA LIDLHNYNLGENHHLRVSFSKSTI" BASE COUNT 847 a 488 c 562 g 914 t ORIGIN 1 ttgtgagcga agctttgtcc ggttcggcaa tggacggaat cgtcactgag gttgcagttg 61 gcgtgaagag aggatctgac gaactactct caggcagtgt tctcagtagt ccgaactcta 121 atatgagcag catggtagtt acagccaatg gtaatgatag taaaaaattt aaaggagaag 181 ataaaatgga tggtgctcct tctcgtgtac ttcatattcg aaaattacct ggggaagtaa 241 cagaaactga agttattgct ttaggcttac cttttggtaa ggtgaccaac atccttatgc 301 tgaaaggaaa aaatcaggca tttttggaac tagcaaccga ggaagcagct attactatgg 361 ttaattacta ttctgctgtg acacctcatc ttcgtaacca accaatatat atccagtact 421 cgaatcacaa agaactaaag acagataata cattaaacca acgtgctcag gcagttcttc 481 aagctgtgac agctgtccag acagcaaata ctcctcttag tggcaccaca gttagcgaga 541 gtgcagtgac tccagcccag agtccagtac ttagaataat tattgacaac atgtactacc 601 ctgtaacact tgatgttctt caccaaatat tttctaagtt tggtgctgta ttgaagataa 661 tcacatttac aaaaaataac cagtttcaag ctttgctcca gtatggtgat ccagtaaatg 721 ctcaacaagc aaaactagcc ctagatggtc agaatattta taatgcctgc tgtaccctaa 781 ggattgattt ttccaaactt gtgaatttga atgtaaaata caacaatgat aaaagtaggg 841 attatactcg acctgatctt ccatctgggg atggacaacc tgcattggac ccagctattg 901 ctgcagcatt tgccaaggag acatccctct tagctgttcc aggagctctg agtcctttgg 961 ccattccaaa tgctgctgca gcagctgctg cagctgctgc tggccgagtg ggtatgcctg 1021 gagtctcagc tggtggcaat acagtcctgt tggttagcaa tttaaatgaa gagatggtta 1081 cgccccaaag tctgtttacc ctcttcggtg tttatggaga tgtgcagcgt gtgaagattt 1141 tatacaataa gaaagacagc gctctaatac agatggctga tggaaaccaa tcacaacttg 1201 ccatgaatca tcttaatgga cagaaaatgt atggaaaaat tattcgtgtt actctgtcta 1261 aacatcagac tgtacagcta cctcgagagg gacttgatga tcaagggcta acaaaagatt 1321 ttggtaattc cccattgcat cgttttaaga aacctggatc caaaaatttt caaaacattt 1381 ttcctccttc tgccaccctt cacctatcta atatccctcc atcagtagca gaagaggatc 1441 tacgaacact gttcgctaac actgggggca ctgtgaaagc atttaagttt tttcaaagag 1501 atcacaaaat ggctcttctt cagatggcaa cagtggaaga agctattcag gccttgattg 1561 atcttcataa ttataacctt ggagaaaacc atcatctgag agtgtctttc tccaagtcaa 1621 caatttaaaa atgggaagat gaagattggg ggtgaatcac attgttcaat gtcatcacct 1681 atttgactgt tcagaaaagt ggggaccaga gtttgatttt ttttgttttt gtttttttgg 1741 ggtttctttt ttttttccat gctgttatca ttccttggtt ataaaatgaa atggcatatg 1801 taaaggcaga gttgttaact gctatatttc atctgttcta tagggaagcc attttgtctg 1861 tttaaaattt cagtttaatt ttgctttttt tttttttttt tttttccttt caacttagtt 1921 gacatacgtg ccttaaaaag gaaaactagt gttgctattg tgcatttact agaaaaaagg 1981 aattggttgt ttagggcaca ctgttatatg ggaattaaaa tatgtttagg caggggtgtg 2041 taaaaaggtt aagtttttgt ttctcctgct tggaacttat tttgaattac tggcttgtca 2101 cctttttttc tatttaatca aataagatac atgatattga aagaataaag cagcattttt 2161 agtttttact accttaggct ttattgcttt gaaaacaaca ttggcctttt gtatctcaca 2221 attctggtct agattcagtt atgaatgtag gcattagtta aaattaacaa gatgcagagt 2281 attaatttct taagacaaca aagtgatttc tgtaagtttg agccctatgt ggaaagcatt 2341 gtggaatctt aaccttttcg tacacactct tgtgggacgt atcatataaa tgtcagcact 2401 aagtaatgtc ttgtttgtgg ctgaatattt ttcgtagatg tttttgaagt tgacatgact 2461 tacgtgcatt taaatatata ttgccatcct tagtttgtaa ttaagatttg gaatatggtt 2521 gtggatttct gagcatgtgc agactggtct agctagttca ggaactggtg catgtatttt 2581 tcaaagataa agaaagtgta ctgcgaaaat atgcaggaag attaattttg tggcagtttt 2641 ctaaaactga caaccaggtg ggaccaaagt ttatgtgcct ttagtcttaa tttaccttgc 2701 attgtaatat tcagttttaa taaatcttca aaatattttg tatttaggaa tagatctgac 2761 tttaataaaa acatggctca gaatctacag gtcaataaaa aaaaaaaaaa a //