LOCUS BC016509 2514 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens secretory carrier membrane protein 4, mRNA (cDNA clone MGC:17276 IMAGE:4180160), complete cds. ACCESSION BC016509 VERSION BC016509.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2514) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2514) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (31-OCT-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 12 Row: j Column: 2 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 50593003. FEATURES Location/Qualifiers source 1..2514 /db_xref="H-InvDB:HIT000037588" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:17276 IMAGE:4180160" /tissue_type="Brain, anaplastic oligodendroglioma with 1p/19q loss" /clone_lib="NCI_CGAP_Brn67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2514 /gene="SCAMP4" /gene_synonym="FLJ33847" /gene_synonym="SCAMP-4" /db_xref="GeneID:113178" /db_xref="HGNC:HGNC:30385" CDS 82..771 /gene="SCAMP4" /gene_synonym="FLJ33847" /gene_synonym="SCAMP-4" /codon_start=1 /product="secretory carrier membrane protein 4" /protein_id="AAH16509.1" /db_xref="GeneID:113178" /db_xref="HGNC:HGNC:30385" /translation="MSEKENNFPPLPKFIPVKPCFYQNFSDEIPVEHQVLVKRIYRLW MFYCATLGVNLIACLAWWIGGGSGTNFGLAFVWLLLFTPCGYVCWFRPVYKAFRADSS FNFMAFFFIFGAQFVLTVIQAIGFSGWGACGWLSAIGFFQYSPGAAVVMLLPAIMFSV SAAMMAIAIMKVHRIYRGAGGSFQKAQTEWNTGTWRNPPSREAQYNNFSGNSLPEYPT VPSYPGSGQWP" BASE COUNT 440 a 861 c 683 g 530 t ORIGIN 1 agactttgcg aagcgctgcg ctcgcgcccg gatccctcag gcggctgcag gcttcagcct 61 gcgctggttg gtgaaacaga gatgtcagaa aaggagaaca acttcccgcc actgcccaag 121 ttcatccctg tgaagccctg cttctaccag aacttctccg acgagatccc agtggagcac 181 caggtcctgg tgaagaggat ctaccggctg tggatgtttt actgcgccac cctcggcgtc 241 aacctcattg cctgcctggc ctggtggatc ggcggaggct cggggaccaa cttcggcctg 301 gccttcgtgt ggctgctcct gttcacgcct tgcggctacg tgtgctggtt ccggcctgtc 361 tacaaggcct tccgagccga cagctccttt aatttcatgg cgtttttctt catcttcgga 421 gcccagtttg tcctgaccgt catccaggcg attggcttct ccggctgggg cgcgtgcggc 481 tggctgtcgg caattggatt cttccagtac agcccgggcg ctgccgtggt catgctgctt 541 ccagccatca tgttctccgt gtcggctgcc atgatggcca tcgcgatcat gaaggtgcac 601 aggatctacc gaggggctgg cggaagcttc cagaaggcac agacggagtg gaacacgggc 661 acttggcgga acccaccgtc gagggaggcc cagtacaaca acttctcagg caacagcctg 721 cccgagtacc ccactgtgcc cagctacccg ggcagtggcc agtggcctta gagggagcct 781 gccctgcccc caccgcccac cacctcctcc ccttcattcc tgctgctacc cctggtcccg 841 agggctggga gtacctgggg ccccatcccc ccagctggga tggtggaagc cggtggtggc 901 cacggaccgc ccccctcctg ccagggccac agaacccgtg ttcatctcat ccgagagcgg 961 agttcctcac aagcactccc cagcagccct tggcctctgc cgtccacagg acgccctctt 1021 gctcccggaa acgtgtggtc acccgccgtc cactgcacgg ctggtacggc cttgtcttca 1081 ggtctcgagg cctgactccg ggggacaggt ggcagcaggt cggccgccct cccgtcctcc 1141 cagagctgct ggcgctgagg tcagagcggg tctgatgggg agctccgtct caccggccac 1201 ccgccgtcac catggcagat gcccttggcc ggaactaata agaggcgtcg gggccagctt 1261 ccggtcccct gcagtgatag agggcttggt gcctagctga gtcctcgctg tccccgccat 1321 cccctgatct gtgcggctcc agcctcgccc cctccccacg tgcaccatac ctggggagtt 1381 cctggtccag ggtatcctgg ggccaccctc cctgcctcca aaacagggat ccctggcagg 1441 ctgtctttcc acgcccctga gttcagagtc ggggacccag gccaggtcgg gagcacagcc 1501 gctccccaaa cccagcaaac cggcagagag ccggtttccc agcagccgga gccctgcagg 1561 agaggccttt gtgttttgtt ttgttttgtt ttttctcttt tgagacagag tttcactctg 1621 tcgcccaggc tggagtgcag tggtgtgatc tcggctcact gcaacctctg cctcccgtgt 1681 tcaagcagtt ctcctgcctc agcctcccaa atagctggga ttacagttgc ctgccaccac 1741 gcccagctaa tttttatatt tttagtacag atggggtttc accatgttgg ccaggctggt 1801 ctcgaactcc tgacctcaag tgatccaccc gccttggcct cccaaagtgc tgggataata 1861 ggtgtcagcc accgcaccca gcctggagtg gccttttatg agaggggacc cgtcaaatct 1921 gtgccttatg gaggggtccg gcagcggcca caattgtctt gtcccctcac cccccaactc 1981 cccctggaac acctctccca ggcaagacat tttcacagca ccattcacaa cggttgggcc 2041 aaaaagaaac ttttccttca tcatttcctg cactcgctga ccacaacttt ggacacccca 2101 ggctgccacc cctccccacc cgttcacccc caggatgctg ttgctgtagg acgcctgctg 2161 ccctggagcc ctccccagga tgtgagccag tcccctcgct ggtacggaat gccgctgggt 2221 gcccggaggc ggccatggtg tctcgatgga cggcagccag gatggagcac ccatgggtct 2281 cacggccatg cttcagggtc ttcaggtcct gcccccggcc agtctgccaa gaggcacccc 2341 cttccccagc ctctcgcctg cactgatgca gacaaaatct cacctggcag gcccaacccc 2401 caccccaccc ctcccccgcc gtgtgtggcc cctcgccgca tcgttggggt tttgttacgt 2461 gaaaatatcc tggaaataaa tacatgtttc tgcacttaga aaaaaaaaaa aaaa //