LOCUS BC016509 2514 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens secretory carrier membrane protein 4, mRNA (cDNA clone
MGC:17276 IMAGE:4180160), complete cds.
ACCESSION BC016509
VERSION BC016509.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2514)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2514)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 12 Row: j Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50593003.
FEATURES Location/Qualifiers
source 1..2514
/db_xref="H-InvDB:HIT000037588"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17276 IMAGE:4180160"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2514
/gene="SCAMP4"
/gene_synonym="FLJ33847"
/gene_synonym="SCAMP-4"
/db_xref="GeneID:113178"
/db_xref="HGNC:HGNC:30385"
CDS 82..771
/gene="SCAMP4"
/gene_synonym="FLJ33847"
/gene_synonym="SCAMP-4"
/codon_start=1
/product="secretory carrier membrane protein 4"
/protein_id="AAH16509.1"
/db_xref="GeneID:113178"
/db_xref="HGNC:HGNC:30385"
/translation="MSEKENNFPPLPKFIPVKPCFYQNFSDEIPVEHQVLVKRIYRLW
MFYCATLGVNLIACLAWWIGGGSGTNFGLAFVWLLLFTPCGYVCWFRPVYKAFRADSS
FNFMAFFFIFGAQFVLTVIQAIGFSGWGACGWLSAIGFFQYSPGAAVVMLLPAIMFSV
SAAMMAIAIMKVHRIYRGAGGSFQKAQTEWNTGTWRNPPSREAQYNNFSGNSLPEYPT
VPSYPGSGQWP"
BASE COUNT 440 a 861 c 683 g 530 t
ORIGIN
1 agactttgcg aagcgctgcg ctcgcgcccg gatccctcag gcggctgcag gcttcagcct
61 gcgctggttg gtgaaacaga gatgtcagaa aaggagaaca acttcccgcc actgcccaag
121 ttcatccctg tgaagccctg cttctaccag aacttctccg acgagatccc agtggagcac
181 caggtcctgg tgaagaggat ctaccggctg tggatgtttt actgcgccac cctcggcgtc
241 aacctcattg cctgcctggc ctggtggatc ggcggaggct cggggaccaa cttcggcctg
301 gccttcgtgt ggctgctcct gttcacgcct tgcggctacg tgtgctggtt ccggcctgtc
361 tacaaggcct tccgagccga cagctccttt aatttcatgg cgtttttctt catcttcgga
421 gcccagtttg tcctgaccgt catccaggcg attggcttct ccggctgggg cgcgtgcggc
481 tggctgtcgg caattggatt cttccagtac agcccgggcg ctgccgtggt catgctgctt
541 ccagccatca tgttctccgt gtcggctgcc atgatggcca tcgcgatcat gaaggtgcac
601 aggatctacc gaggggctgg cggaagcttc cagaaggcac agacggagtg gaacacgggc
661 acttggcgga acccaccgtc gagggaggcc cagtacaaca acttctcagg caacagcctg
721 cccgagtacc ccactgtgcc cagctacccg ggcagtggcc agtggcctta gagggagcct
781 gccctgcccc caccgcccac cacctcctcc ccttcattcc tgctgctacc cctggtcccg
841 agggctggga gtacctgggg ccccatcccc ccagctggga tggtggaagc cggtggtggc
901 cacggaccgc ccccctcctg ccagggccac agaacccgtg ttcatctcat ccgagagcgg
961 agttcctcac aagcactccc cagcagccct tggcctctgc cgtccacagg acgccctctt
1021 gctcccggaa acgtgtggtc acccgccgtc cactgcacgg ctggtacggc cttgtcttca
1081 ggtctcgagg cctgactccg ggggacaggt ggcagcaggt cggccgccct cccgtcctcc
1141 cagagctgct ggcgctgagg tcagagcggg tctgatgggg agctccgtct caccggccac
1201 ccgccgtcac catggcagat gcccttggcc ggaactaata agaggcgtcg gggccagctt
1261 ccggtcccct gcagtgatag agggcttggt gcctagctga gtcctcgctg tccccgccat
1321 cccctgatct gtgcggctcc agcctcgccc cctccccacg tgcaccatac ctggggagtt
1381 cctggtccag ggtatcctgg ggccaccctc cctgcctcca aaacagggat ccctggcagg
1441 ctgtctttcc acgcccctga gttcagagtc ggggacccag gccaggtcgg gagcacagcc
1501 gctccccaaa cccagcaaac cggcagagag ccggtttccc agcagccgga gccctgcagg
1561 agaggccttt gtgttttgtt ttgttttgtt ttttctcttt tgagacagag tttcactctg
1621 tcgcccaggc tggagtgcag tggtgtgatc tcggctcact gcaacctctg cctcccgtgt
1681 tcaagcagtt ctcctgcctc agcctcccaa atagctggga ttacagttgc ctgccaccac
1741 gcccagctaa tttttatatt tttagtacag atggggtttc accatgttgg ccaggctggt
1801 ctcgaactcc tgacctcaag tgatccaccc gccttggcct cccaaagtgc tgggataata
1861 ggtgtcagcc accgcaccca gcctggagtg gccttttatg agaggggacc cgtcaaatct
1921 gtgccttatg gaggggtccg gcagcggcca caattgtctt gtcccctcac cccccaactc
1981 cccctggaac acctctccca ggcaagacat tttcacagca ccattcacaa cggttgggcc
2041 aaaaagaaac ttttccttca tcatttcctg cactcgctga ccacaacttt ggacacccca
2101 ggctgccacc cctccccacc cgttcacccc caggatgctg ttgctgtagg acgcctgctg
2161 ccctggagcc ctccccagga tgtgagccag tcccctcgct ggtacggaat gccgctgggt
2221 gcccggaggc ggccatggtg tctcgatgga cggcagccag gatggagcac ccatgggtct
2281 cacggccatg cttcagggtc ttcaggtcct gcccccggcc agtctgccaa gaggcacccc
2341 cttccccagc ctctcgcctg cactgatgca gacaaaatct cacctggcag gcccaacccc
2401 caccccaccc ctcccccgcc gtgtgtggcc cctcgccgca tcgttggggt tttgttacgt
2461 gaaaatatcc tggaaataaa tacatgtttc tgcacttaga aaaaaaaaaa aaaa
//