LOCUS BC016359 1562 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens 15 kDa selenoprotein, mRNA (cDNA clone MGC:24512
IMAGE:4096759), complete cds.
ACCESSION BC016359
VERSION BC016359.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1562)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1562)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 32 Row: g Column: 15.
FEATURES Location/Qualifiers
source 1..1562
/db_xref="H-InvDB:HIT000037553"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:24512 IMAGE:4096759"
/tissue_type="Bone marrow, chronic myelogenous leukemia"
/clone_lib="NIH_MGC_54"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1562
/gene="SEP15"
/db_xref="GeneID:9403"
/db_xref="MIM:606254"
CDS 9..506
/gene="SEP15"
/codon_start=1
/transl_except=(pos:294..296,aa:Sec)
/product="15 kDa selenoprotein"
/protein_id="AAH16359.3"
/db_xref="GeneID:9403"
/db_xref="MIM:606254"
/translation="MVAMAAGPSGCLVPAFGLRLLLATVLQAVSAFGAEFSSEACREL
GFSSNLLCSSCDLLGQFNLLQLDPDCRGCCQEEAQFETKKLYAGAILEVCGUKLGRFP
QVQAFVRSDKPKLFRGLQIKYVRGSDPVLKLLDDNGNIAEELSILKWNTDSVEEFLSE
KLERI"
BASE COUNT 492 a 246 c 298 g 526 t
ORIGIN
1 gggggaaaat ggtagcgatg gcggctgggc cgagtgggtg tctggtgccg gcgtttgggc
61 tacggttgtt gttggcgact gtgcttcaag cggtgtctgc ttttggggca gagttttcat
121 cggaggcatg cagagagtta ggcttttcta gcaacttgct ttgcagctct tgtgatcttc
181 tcggacagtt caacctgctt cagctggatc ctgattgcag aggatgctgt caggaggaag
241 cacaatttga aaccaaaaag ctgtatgcag gagctattct tgaagtttgt ggatgaaaat
301 tgggaaggtt ccctcaagtc caagcttttg ttaggagtga taaacccaaa ctgttcagag
361 gactgcaaat caagtatgtc cgtggttcag accctgtatt aaagcttttg gacgacaatg
421 ggaacattgc tgaagaactg agcattctca aatggaacac agacagtgta gaagaattcc
481 tgagtgaaaa gttggaacgc atataaatct tgcttaaatt ttgtcctatc cttttgttac
541 cttatcaaat gaaatattac agcacctaga aaataattta gttttgcttg cttccattga
601 tcagtctttt acttgaggca ttaaatatct aattaaatcg tgaaatggca gtatagtcca
661 tgatatctaa ggagttggca agcttaacaa aacccatttt ttataaatgt ccatcctcct
721 gcatttgttg ataccactaa caaaatgctt tgtaacagac ttgcggttaa ttatgcaaat
781 gatagtttgt gataattggt ccagttttac gaacaacaga tttctaaatt agagaggtta
841 acaagacaga tgattactat gcctcatgtg ctgtgtgctc tttgaaagga atgacagcag
901 actacaaagc aaataagata tactgagcct caacagattg cctgctcctc agagtctctc
961 ctatttttgt attacccagc tttcttttta atacaaatgt tatttatagt ttacaatgaa
1021 tgcactgcat aaaaactttg tagcttcatt attgtaaaac atattcaaga tcctacagta
1081 agagtgaaac attcacaaag atttgcgtta atgaagacta cacagaaaac ctttctaggg
1141 atttgtgtgg atcagataca tacttggcaa atttttgagt tttacattct tacagaaaag
1201 tccatttaaa agtgatcatt tgtaagacca aaatataaat aaaaagtttc aaaaatctat
1261 ctgaatttgg aattcttctg gtttgttctt tcatgtttaa aaatgatgtt tttcaatgca
1321 tttttttcat gtaagccctt tttttagcca aaatgtaaaa atggctgtaa tatttaaaac
1381 ttataacatc ttattgttgg taatagtgct ttatatttgt ctgattttat ttttcaaagt
1441 tttttcattt atgaacacat tttcattggt atattattta aggaatatct cttgatatag
1501 aatttttata ttaaaaatga tttttctttg ccaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1561 aa
//