LOCUS BC016298 2366 bp mRNA linear HUM 11-DEC-2003
DEFINITION Homo sapiens core-binding factor, runt domain, alpha subunit 2;
translocated to, 2, mRNA (cDNA clone IMAGE:3836163), partial cds.
ACCESSION BC016298
VERSION BC016298.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2366)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2366)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (29-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC016298.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 14 Row: d Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..2366
/db_xref="H-InvDB:HIT000088941"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3836163"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_9"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2366
/gene="CBFA2T2"
/gene_synonym="EHT"
/gene_synonym="MTGR1"
/gene_synonym="ZMYND3"
/db_xref="GeneID:9139"
/db_xref="MIM:603672"
CDS <1..1453
/gene="CBFA2T2"
/gene_synonym="EHT"
/gene_synonym="MTGR1"
/gene_synonym="ZMYND3"
/codon_start=2
/product="CBFA2T2 protein"
/protein_id="AAH16298.2"
/db_xref="GeneID:9139"
/db_xref="MIM:603672"
/translation="FLTTLQQFGNDISPEIGEKVRTLVLALVNSTVTIEEFHCKLQEA
TNFPLRPFVIPFLKANLPLLQRELLHCARAAKQTPSQYLAQHEHLLLNTSIASPADSS
ELLMEVHGNGKRPSPERREENSFDRDTIAPEPPAKRVCTISPAPRHSPALTVPLMNPG
GQFHPTPPPLQHYTLEDIATSHLYREPNKMLEHREVRDRHHSLGLNGGYQDELVDHRL
TEREWADEWKHLDHALNCIMEMVEKTRRSMAVLRRCQESDREELNYWKRRYNENTELR
KTGTELVSRQHSPGSADSLSNDSQREFNSRPGTGYVPVEFWKKTEEAVNKVKIQAMSE
VQKAVAEAEQKAFEVIATERARMEQTIADVKRQAAEDAFLVINEQEESTENCWNCGRK
ASETCSGCNIARYCGSFCQHKDWERHHRLCGQNLHGQSPHGQGRPLLPVGRGSSARSA
DCSVPSPALDKTSATTSRSSTPASVTAIDTNGL"
misc_feature 2..253
/gene="CBFA2T2"
/gene_synonym="EHT"
/gene_synonym="MTGR1"
/gene_synonym="ZMYND3"
/note="TAFH; Region: TAF homology"
/db_xref="CDD:smart00549"
misc_feature 1157..1267
/gene="CBFA2T2"
/gene_synonym="EHT"
/gene_synonym="MTGR1"
/gene_synonym="ZMYND3"
/note="zf-MYND; Region: MYND finger"
/db_xref="CDD:pfam01753"
BASE COUNT 609 a 638 c 601 g 518 t
ORIGIN
1 ctttcttacc actctgcaac agtttggcaa tgacatctcc cctgagattg gggagaaggt
61 gcggactctt gttcttgcac tggtgaactc aacagtgaca attgaggaat tccactgtaa
121 gctccaagaa gccacaaact ttccccttcg tccttttgtg attccatttc tcaaggccaa
181 cctgcccctg ctgcagcggg aactgctgca ctgcgctcgg gcggccaagc agaccccatc
241 ccagtacctg gctcagcacg aacaccttct gctcaacaca agcattgcat cgcctgctga
301 ctcgtcagag ttgctcatgg aggtgcacgg aaatgggaag aggcccagtc cagagaggag
361 agaagagaat agttttgata gagacacaat tgctcctgag cctcctgcca agagagtatg
421 taccatcagc cctgctcctc ggcacagtcc tgctctcact gtgcccctca tgaatcccgg
481 gggccaattc catcctaccc ctccacctct tcagcattac accttagagg atattgcaac
541 ttctcacctg tatcgggaac ccaacaagat gctagagcat cgagaagttc gtgatagaca
601 ccacagtctt ggtctaaatg gaggctatca agatgagttg gtagatcatc gtttgacaga
661 aagggaatgg gctgatgaat ggaaacatct tgaccatgcg ctgaattgca ttatggaaat
721 ggtagagaaa acaaggcgct ctatggcagt tctgcggcgc tgtcaggaat cagatcgtga
781 agaactcaac tactggaaaa gacggtacaa tgaaaacaca gagctgagga aaacggggac
841 cgagttggtc tccaggcagc acagccctgg gagtgcagat tctctcagca atgattctca
901 gagagagttc aacagcaggc caggtacagg atacgtacct gtggagtttt ggaaaaaaac
961 agaagaagct gtgaataagg tgaaaattca ggccatgtca gaagtacaga aggccgtcgc
1021 tgaggcagag cagaaagcct ttgaagtgat tgcaacagag agagcacgaa tggagcaaac
1081 catagcggat gtcaagcggc aggccgcaga ggatgctttc ctcgtcatca atgagcaaga
1141 ggagtccacg gagaactgct ggaactgtgg ccgcaaagcc agcgagacat gcagtggctg
1201 caatatcgcg cgatactgtg gctctttctg ccagcacaag gactgggagc ggcaccaccg
1261 cctctgtggt cagaacctgc atggccagag cccccacggc cagggccggc cgctgcttcc
1321 tgtaggcagg ggctcctctg ccaggtccgc cgactgcagc gtgcccagcc cagccctcga
1381 caagacctcg gcaaccacat cgcgttcctc aacacctgct tctgtgacag ctatcgacac
1441 caacggactc tgagccccgg actctgctta ccctgatggc tgctcagcac cacagagtgc
1501 ttgggctgag ggactgactg ttggaacccg tgcatgtagc tgccgggtca tcagcaagaa
1561 atgaattgga ggcaggaaga gtccaagcct gaataataac accccacagc ctctctgtgc
1621 acttgctgtc tgcggagcca gtgtgccatt ctctgcacat gggcagccag cctgagctgc
1681 ctcctccatg gctttcctgg tttgttcctc tctccactga agctgactta gccggcccct
1741 tttcagtgta gaccaccagc tcccctcccc atctccttga gtcagcagac tgtccaatgt
1801 gctcagccag gctggaggcg gcaggcggca ggcagcaggc tgtggaggag gcccctcggt
1861 cagggagcgg cctgcctcac ccctgaatag ctccttcggc cccatctcca tcctcagcag
1921 atgacactga ttggcctcac ggggacttgg gtaagcaaca ggcggcattc aggactcttc
1981 tcaaccctgc tgttcagact tgataagatc tcagagtcca caggaaagaa gtcactgttg
2041 caataaaagc acccgtagta gcaaaaacat aaaacaaata aaacttcccc cacatcacag
2101 atgattttgg acaagatttt ccaaccttgc tggctacttt agtttgggac ctgttttttt
2161 tctcatttga ttttgcttgt gcagaaaata gtttccagca catggattga tctgagagag
2221 aatgaggctc agttgtggat agtctgtttt ctctgagcat gttggccaac tagtatcgtc
2281 aaattattga gtggatcatc tcttggaaat gcagaacttc tgccaccact tggctatttg
2341 cacagtcaaa aaaaaaaaaa aaaaaa
//