LOCUS BC016292 788 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ubiquitin-conjugating enzyme E2C, mRNA (cDNA clone
MGC:9617 IMAGE:3910286), complete cds.
ACCESSION BC016292
VERSION BC016292.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 788)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 788)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 15 Row: g Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13376244.
FEATURES Location/Qualifiers
source 1..788
/db_xref="H-InvDB:HIT000037516"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9617 IMAGE:3910286"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..788
/gene="UBE2C"
/gene_synonym="dJ447F3.2"
/gene_synonym="UBCH10"
/db_xref="GeneID:11065"
/db_xref="HGNC:HGNC:15937"
/db_xref="MIM:605574"
CDS 50..589
/gene="UBE2C"
/gene_synonym="dJ447F3.2"
/gene_synonym="UBCH10"
/codon_start=1
/product="ubiquitin-conjugating enzyme E2C"
/protein_id="AAH16292.1"
/db_xref="GeneID:11065"
/db_xref="HGNC:HGNC:15937"
/db_xref="MIM:605574"
/translation="MASQNRDPAATSVAAARKGAEPSGGAARGPVGKRLQQELMTLMM
SGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPC
YHPNVDTQGNICLDILKEKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPT
AFKKYLQETYSKQVTSQEP"
BASE COUNT 187 a 214 c 181 g 206 t
ORIGIN
1 gttgcagtcg tgttctccga gttcctgtct ctctgccaac gccgcccgga tggcttccca
61 aaaccgcgac ccagccgcca ctagcgtcgc cgccgcccgt aaaggagctg agccgagcgg
121 gggcgccgcc cggggtccgg tgggcaaaag gctacagcag gagctgatga ccctcatgat
181 gtctggcgat aaagggattt ctgccttccc tgaatcagac aaccttttca aatgggtagg
241 gaccatccat ggagcagctg gaacagtata tgaagacctg aggtataagc tctcgctaga
301 gttccccagt ggctaccctt acaatgcgcc cacagtgaag ttcctcacgc cctgctatca
361 ccccaacgtg gacacccagg gtaacatatg cctggacatc ctgaaggaaa agtggtctgc
421 cctgtatgat gtcaggacca ttctgctctc catccagagc cttctaggag aacccaacat
481 tgatagtccc ttgaacacac atgctgccga gctctggaaa aaccccacag cttttaagaa
541 gtacctgcaa gaaacctact caaagcaggt caccagccag gagccctgac ccaggctgcc
601 cagcctgtcc ttgtgtcgtc tttttaattt ttccttagat ggtctgtcct ttttgtgatt
661 tctgtatagg actctttatc ttgagctgtg gtatttttgt tttgtttttg tcttttaaat
721 taagcctcgg ttgagccctt gtatattaaa taaatgcatt tttgtccttt tttaaaaaaa
781 aaaaaaaa
//