LOCUS BC016179 2276 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens heat shock 70kDa protein 8, mRNA (cDNA clone MGC:17984
IMAGE:3920744), complete cds.
ACCESSION BC016179
VERSION BC016179.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2276)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2276)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 15 Row: m Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24234684.
FEATURES Location/Qualifiers
source 1..2276
/db_xref="H-InvDB:HIT000037498"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17984 IMAGE:3920744"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2276
/gene="HSPA8"
/gene_synonym="HSC54"
/gene_synonym="HSC70"
/gene_synonym="HSC71"
/gene_synonym="HSP71"
/gene_synonym="HSP73"
/gene_synonym="LAP1"
/gene_synonym="MGC29929"
/gene_synonym="NIP71"
/db_xref="GeneID:3312"
/db_xref="HGNC:HGNC:5241"
/db_xref="MIM:600816"
CDS 59..1999
/gene="HSPA8"
/gene_synonym="HSC54"
/gene_synonym="HSC70"
/gene_synonym="HSC71"
/gene_synonym="HSP71"
/gene_synonym="HSP73"
/gene_synonym="LAP1"
/gene_synonym="MGC29929"
/gene_synonym="NIP71"
/codon_start=1
/product="heat shock 70kDa protein 8"
/protein_id="AAH16179.1"
/db_xref="GeneID:3312"
/db_xref="HGNC:HGNC:5241"
/db_xref="MIM:600816"
/translation="MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF
TDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPK
VQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKD
AGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFE
VKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSS
STQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDI
VLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLL
LLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMT
KDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKG
RLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDED
KQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGG
FPGGGAPPSGGASSGPTIEEVD"
BASE COUNT 691 a 482 c 532 g 571 t
ORIGIN
1 ctcttgggtt ttttgtggct tccttcgtta ttggagccag gcctacacgc cagcaaccat
61 gtccaaggga cctgcagttg gtattgatct tggcaccacc tactcttgtg tgggtgtttt
121 ccagcacgga aaagtcgaga taattgccaa tgatcaggga aaccgaacca ctccaagcta
181 tgtcgccttt acggacactg aacggttgat cggtgatgcc gcaaagaatc aagttgcaat
241 gaaccccacc aacacagttt ttgatgccaa acgtctgatt ggacgcagat ttgatgatgc
301 tgttgtccag tctgatatga aacattggcc ctttatggtg gtgaatgatg ctggcaggcc
361 caaggtccaa gtagaataca agggagagac caaaagcttc tatccagagg aggtgtcttc
421 tatggttctg acaaagatga aggaaattgc agaagcctac cttgggaaga ctgttaccaa
481 tgctgtggtc acagtgccag cttactttaa tgactctcag cgtcaggcta ccaaagatgc
541 tggaactatt gctggtctca atgtacttag aattattaat gagccaactg ctgctgctat
601 tgcttacggc ttagacaaaa aggttggagc agaaagaaac gtgctcatct ttgacctggg
661 aggtggcact tttgatgtgt caatcctcac tattgaggat ggaatctttg aggtcaagtc
721 tacagctgga gacacccact tgggtggaga agattttgac aaccgaatgg tcaaccattt
781 tattgctgag tttaagcgca agcataagaa ggacatcagt gagaacaaga gagctgtaag
841 acgcctccgt actgcttgtg aacgtgctaa gcgtaccctc tcttccagca cccaggccag
901 tattgagatc gattctctct atgaaggaat cgacttctat acctccatta cccgtgcccg
961 atttgaagaa ctgaatgctg acctgttccg tggcaccctg gacccagtag agaaagccct
1021 tcgagatgcc aaactagaca agtcacagat tcatgatatt gtcctggttg gtggttctac
1081 tcgtatcccc aagattcaga agcttctcca agacttcttc aatggaaaag aactgaataa
1141 gagcatcaac cctgatgaag ctgttgctta tggtgcagct gtccaggcag ccatcttgtc
1201 tggagacaag tctgagaatg ttcaagattt gctgctcttg gatgtcactc ctctttccct
1261 tggtattgaa actgctggtg gagtcatgac tgtcctcatc aagcgtaata ccaccattcc
1321 taccaagcag acacagacct tcactaccta ttctgacaac cagcctggtg tgcttattca
1381 ggtttatgaa ggcgagcgtg ccatgacaaa ggataacaac ctgcttggca agtttgaact
1441 cacaggcata cctcctgcac cccgaggtgt tcctcagatt gaagtcactt ttgacattga
1501 tgccaatggt atactcaatg tctctgctgt ggacaagagt acgggaaaag agaacaagat
1561 tactatcact aatgacaagg gccgtttgag caaggaagac attgaacgta tggtccagga
1621 agctgagaag tacaaagctg aagatgagaa gcagagggac aaggtgtcat ccaagaattc
1681 acttgagtcc tatgccttca acatgaaagc aactgttgaa gatgagaaac ttcaaggcaa
1741 gattaacgat gaggacaaac agaagattct ggacaagtgt aatgaaatta tcaactggct
1801 tgataagaat cagactgccg agaaggaaga atttgaacat caacagaaag agctggagaa
1861 agtttgcaac cccatcatca ccaagctgta ccagagtgca ggaggcatgc caggaggaat
1921 gcctggggga tttcctggtg gtggagctcc tccctctggt ggtgcttcct cagggcccac
1981 cattgaagag gttgattaag ccaaccaagt gtagatgtag cattgttcca cacatttaaa
2041 acatttgaag gacctaaatt cgtagcaaat tctgtggcag ttttaaaaag ttaagctgct
2101 atagtaagtt actgggcatt ctcaatactt gaatatggaa catatgcaca ggggaaggaa
2161 ataacattgc actttataaa cactgtattg taagtggaaa atgcaatgtc ttaaataaaa
2221 ctatttaaaa ttggcaccaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//