LOCUS BC016169 1936 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens GIPC PDZ domain containing family, member 1, mRNA
(cDNA clone MGC:15889 IMAGE:3530664), complete cds.
ACCESSION BC016169
VERSION BC016169.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1936)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1936)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 23 Row: h Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42544139.
FEATURES Location/Qualifiers
source 1..1936
/db_xref="H-InvDB:HIT000037493"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15889 IMAGE:3530664"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1936
/gene="GIPC1"
/gene_synonym="GIPC"
/gene_synonym="GLUT1CBP"
/gene_synonym="Hs.6454"
/gene_synonym="IIP-1"
/gene_synonym="MGC15889"
/gene_synonym="MGC3774"
/gene_synonym="NIP"
/gene_synonym="SEMCAP"
/gene_synonym="SYNECTIIN"
/gene_synonym="TIP-2"
/db_xref="GeneID:10755"
/db_xref="HGNC:HGNC:1226"
/db_xref="MIM:605072"
CDS 260..1261
/gene="GIPC1"
/gene_synonym="GIPC"
/gene_synonym="GLUT1CBP"
/gene_synonym="Hs.6454"
/gene_synonym="IIP-1"
/gene_synonym="MGC15889"
/gene_synonym="MGC3774"
/gene_synonym="NIP"
/gene_synonym="SEMCAP"
/gene_synonym="SYNECTIIN"
/gene_synonym="TIP-2"
/codon_start=1
/product="GIPC PDZ domain containing family, member 1"
/protein_id="AAH16169.1"
/db_xref="GeneID:10755"
/db_xref="HGNC:HGNC:1226"
/db_xref="MIM:605072"
/translation="MPLGLGRRKKAPPLVENEEAEPGRGGLGVGEPGPLGGGGSGGPQ
MGLPPPPPALRPRLVFHTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPTAEVMFCTL
NTHKVDMDKLLGGQIGLEDFIFAHVKGQRKEVEVFKSEDALGLTITDNGAGYAFIKRI
KEGSVIDHIHLISVGDMIEAINGQSLLGCRHYEVARLLKELPRGRTFTLKLTEPRKAF
DMISQRSAGGRPGSGPQLGTGRGTLRLRSRGPATVEDLPSAFEEKAIEKVDDLLESYM
GIRDTELAATMVELGKDKRNPDELAEALDERLGDFAFPDEFVFDVWGAIGDAKVGRY"
BASE COUNT 371 a 605 c 630 g 330 t
ORIGIN
1 ctggagtttg cggagggccg agccgggtgc gcacggggag gcggaggcag cggcggcggc
61 ggcggcggcg gcggcggcgg agcagatgaa gaaactgagg ccctgtgatg tgaagtgact
121 tgccccccag ccacacagct ggaccattct ggctgctgtc tggacaagaa gtcgtagggg
181 gtgagggtgg aagctgggaa acccacagga ggcaaccaca ctagtttaga tcttctggtg
241 accccacttc tcgctgctca tgccgctggg actggggcgg cggaaaaagg cgccccctct
301 agtggaaaat gaggaggctg agccaggccg tggagggctg ggcgtggggg agccagggcc
361 tctgggcgga ggtgggtcgg ggggccccca aatgggcttg cccccccctc ccccagccct
421 gcggccccgc ctcgtgttcc acacccagct ggcccatggc agtcccactg gccgcatcga
481 gggcttcacc aacgtcaagg agctgtatgg caagatcgcc gaggccttcc gcctgccaac
541 tgccgaggtg atgttctgca ccctgaacac ccacaaagtg gacatggaca agctcctggg
601 gggccagatc gggctggagg acttcatctt cgcccacgtg aaggggcagc gcaaggaggt
661 ggaggtgttc aagtcggagg atgcactcgg gctcaccatc acggacaacg gggctggcta
721 cgccttcatc aagcgcatca aggagggcag cgtgatcgac cacatccacc tcatcagcgt
781 gggcgacatg atcgaggcca ttaacgggca gagcctgctg ggctgccggc actacgaggt
841 ggcccggctg ctcaaggagc tgccccgagg ccgtaccttc acgctgaagc tcacggagcc
901 tcgcaaggcc ttcgacatga tcagccagcg ttcagcgggt ggccgccctg gctctggccc
961 acaactgggc actggccgag ggaccctgcg gctccgatcc cggggccccg ccacggtgga
1021 ggatctgccc tctgcctttg aagagaaggc cattgagaag gtggatgacc tgctggagag
1081 ttacatgggt atcagggaca cggagctggc ggccaccatg gtggagctgg gaaaggacaa
1141 aaggaacccg gatgagctgg ccgaggccct ggacgaacgg ctgggtgact ttgccttccc
1201 tgacgagttc gtctttgacg tctggggcgc cattggggac gccaaggtcg gccgctacta
1261 ggactgcccc cggaccctgc gatgatgacc cgggcgcaac ctggtggggg cccccagcag
1321 ggacactgac gtcaggaccc gagcctccag cctgagccta gctcagcagc ccaaggacga
1381 tggtgagggg aggtggggcc aggccccctg ccccgctcca atcggtacca tcccctccct
1441 ggttcccagt ctggccgggg tccccggccc ccctgtgccc tgttccccac ctacctcagc
1501 tgggtcaggc acagggaggg gagggatcag ccaaattggg cggccacccc cgcctccacc
1561 actttccacc atcagctgcc aaactggtcc ctctgtctcc ctggggcctt gggttctgtt
1621 tgggggtcat gaccttccta gtttcctgac gcagggaata caggggagag ggttgtcctt
1681 ccccccagca aatgcaataa tgccctcacc cctcctgaga ggagccccct ccctgtggag
1741 cctgttacct ccgcatttga cacgagtctg ctgtgaaccc cgcaacctcc tccccacctc
1801 ccatctctcc ttccaggccc atccctggcc cagagcagga gggagggagg gacgatggcg
1861 gtgggttttt gtatctgaat ttgctgtctt gaacataaag aatctatctg ctgttaaaaa
1921 aaaaaaaaaa aaaaaa
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