LOCUS BC016149 1469 bp mRNA linear HUM 27-OCT-2006
DEFINITION Homo sapiens chromosome 18 open reading frame 25, mRNA (cDNA clone
MGC:12909 IMAGE:4040087), complete cds.
ACCESSION BC016149
VERSION BC016149.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1469)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1469)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 18 Row: o Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 56549655.
FEATURES Location/Qualifiers
source 1..1469
/db_xref="H-InvDB:HIT000037483"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12909 IMAGE:4040087"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_18"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1469
/gene="C18orf25"
/gene_synonym="ARKL1"
/gene_synonym="MGC12909"
/db_xref="GeneID:147339"
/db_xref="HGNC:HGNC:28172"
CDS 53..1267
/gene="C18orf25"
/gene_synonym="ARKL1"
/gene_synonym="MGC12909"
/codon_start=1
/product="chromosome 18 open reading frame 25"
/protein_id="AAH16149.1"
/db_xref="GeneID:147339"
/db_xref="HGNC:HGNC:28172"
/translation="MKMEEAVGKVEELIESEAPPKASEQETAKEEDGSVELESQVQKD
GVADSTVISSMPCLLMELRRDSSESQLASTESDKPTTGRVYESDSSNHCMLSPSSSGH
LADSDTLSSAEENEPSQAETAVEGDPSGVSGATVGRKSRRSRSESETSTMAAKKNRQS
SDKQNGRVAKVKGHRSQKHKERIRLLRQKREAAARKKYNLLQDSSTSDSDLTCDSSTS
SSDDDEEVSGSSKTITAEIPDGPPVVAHYDMSDTNSDPEVVNVDNLLAAAVVQEHSNS
VGGQDTGATWRTSGLLEELNAEAGHLDPGFLASDKTSAGNAPLNEEINIASSDSEVEI
VGVQEHARCVHPRGGVIQSVSSWKHGSGTQYVSTRQTQSWTAVTPQQTWASPAEVVDL
TLDEDSRRKYLL"
BASE COUNT 430 a 317 c 369 g 353 t
ORIGIN
1 ctttgatatc atttcctaga ctctactcca tgatttaact tgaaattctg aaatgaagat
61 ggaggaggca gtgggaaaag ttgaagaact cattgagtcc gaagccccac caaaagcatc
121 tgaacaagag acagccaagg aggaagatgg atctgtagaa ctggaatctc aagttcagaa
181 agatggtgta gcggattcta cagttatttc ttcaatgccc tgcttgttga tggaactgag
241 aagggactct tctgagtctc agttagcatc cacagagagt gacaagccta caactggccg
301 agtttatgag agtgactcct ctaatcactg catgctttcc ccttcctcta gtggtcacct
361 ggctgattca gatacgttgt cttccgcaga agagaatgaa ccctctcagg cagaaacggc
421 ggtagaagga gacccttcag gagtgtctgg tgccacagtt gggcgcaagt ctaggcggtc
481 ccgatctgaa agtgaaactt ccactatggc tgccaagaaa aaccggcaat ccagtgataa
541 acagaatggc cgagtcgcca aggttaaagg tcatcggagc caaaagcaca aggagaggat
601 caggctactg aggcagaaac gggaggctgc tgcaaggaag aaatataacc tgctgcagga
661 cagtagtacc agtgatagtg acctgacttg tgactcaagc acgagctcat cagatgatga
721 tgaagaggtt tcagggagca gcaagacaat cactgcagag ataccagatg gacctccagt
781 tgtagctcat tatgatatgt ctgacaccaa ctctgaccca gaagtggtaa atgtggacaa
841 tttattggcg gctgcagtag ttcaagagca cagtaattct gtaggcggcc aggacacagg
901 agctacctgg aggaccagcg ggcttctaga ggagctgaat gcagaggcag gtcatttgga
961 tccaggattc ctagcaagtg acaaaacatc tgctggcaat gcgccactca atgaagaaat
1021 taacattgcg tcttcagata gtgaagtaga gattgtggga gttcaggaac atgcaaggtg
1081 tgttcatcct cgaggtggtg tgattcagag tgtttcttca tggaagcatg gctcgggcac
1141 gcagtatgtt agcaccaggc aaacacagtc atggactgct gtgactcccc agcagacttg
1201 ggcttcacca gcagaagttg ttgaccttac cttggatgag gatagcaggc gtaaatacct
1261 actgtaatac aatgtcactg tgtttcctct gcactgttcc cttccacttc ctcatcctct
1321 ttgtgacatg gaagttcatt gtcatagctt cagcttcaga agctgtttgt ggcatttgta
1381 ggattcaaac tcatggaaaa ttccctcctc ttcccccctt tttttaatta aaagaagtca
1441 cttaggaaaa taaaaaaaaa aaaaaaaaa
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