LOCUS BC016137 2208 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens KIAA0020, mRNA (cDNA clone MGC:8749 IMAGE:3908516),
complete cds.
ACCESSION BC016137
VERSION BC016137.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2208)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2208)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC016137.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 15 Row: d Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33620772.
FEATURES Location/Qualifiers
source 1..2208
/db_xref="H-InvDB:HIT000037474"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8749 IMAGE:3908516"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2208
/gene="KIAA0020"
/gene_synonym="HLA-HA8"
/gene_synonym="MGC8749"
/gene_synonym="RP11-526D20.2"
/gene_synonym="XTP5"
/db_xref="GeneID:9933"
/db_xref="HGNC:HGNC:29676"
/db_xref="MIM:609960"
CDS 1..1947
/gene="KIAA0020"
/gene_synonym="HLA-HA8"
/gene_synonym="MGC8749"
/gene_synonym="RP11-526D20.2"
/gene_synonym="XTP5"
/codon_start=1
/product="KIAA0020"
/protein_id="AAH16137.2"
/db_xref="GeneID:9933"
/db_xref="HGNC:HGNC:29676"
/db_xref="MIM:609960"
/translation="MEVKGKKQFTGKNTKTAQEKNRFHKNSDSGSSKTFPTRKVAKEG
GPKVTSRNFEKSITKLGKKGVKQFKNKQQGDKSPKNKFQPANKFNKKRKFQPDGRSDE
SAAKKPKWDDFKKKKKELKQSRQLSDKTNYDIVVRAKQMWEILRRKDCDKEKRVKLMS
DLQKLIQGKIKTIAFAHDSTRVIQCYIQYGNEEQRKQAFEELRDDLVELSKAKYSRNI
VKKFLMYGSKPQIAEIIRSFKGHVRKMLRHAEASAIVEYAYNDKAILEQRNMLTEELY
GNTFQLYKSADHPTLDKVLELQPEKLELIMDEMKQILTPMAQKEAVIKHSLVHKVFLD
FFTYAPPKLRSEMIEAIREAVVYLAHTHDGARVAMHCLWHGTPKDRKVIVKTMKTYVE
KVANGQYSHLVLLAAFDCIDDTKLVKQIIISEIISSLPSIVNDKYGRKVLLYLLSPRD
PAHTVREIIEVLQKGDGNAHSKKDTEVRRRELLESISPALLSYLQEHAQEVVLDKSAC
VLVSDILGSATGDVQPTMNAIASLAATGLHPGGKDGELHIAEHPAGHLVLKWLIEQDK
KMKENGREGCFAKTLVEHVGMKNLKSWASVNRGAIILSSLLQSCDLEVANKVKAALKS
LIPTLEKTKSTSKGIEILLEKLST"
BASE COUNT 836 a 372 c 493 g 507 t
ORIGIN
1 atggaagtta aagggaaaaa gcaattcaca ggaaagaata caaagacagc acaagaaaaa
61 aacagatttc ataaaaatag tgattctggt tcttcaaaga catttccaac aaggaaagtt
121 gctaaagaag gtggacctaa agtcacatct aggaactttg agaaaagtat cacaaaactt
181 gggaaaaagg gtgtaaagca gttcaagaat aagcagcaag gggacaaatc accaaagaac
241 aaattccagc cggcaaataa attcaacaag aagagaaaat tccagccaga tggtagaagc
301 gatgaatcag cagccaagaa gcccaaatgg gatgacttca aaaagaagaa gaaagaactg
361 aagcaaagca gacaactcag tgataaaacc aactatgaca ttgttgttcg ggcaaagcag
421 atgtgggaga ttttaagaag aaaagactgt gacaaagaaa aaagagtaaa gttaatgagt
481 gatttgcaga agttgattca agggaaaatt aaaactattg catttgcaca cgattcaact
541 cgtgtgatcc agtgttacat tcagtatggt aatgaagaac agagaaaaca ggcttttgaa
601 gaattgcgag atgatttggt tgagttaagt aaagccaaat attcgagaaa tattgttaag
661 aaatttctca tgtatggaag taaaccacag attgcagaga taatcagaag ttttaaaggc
721 cacgtgagga agatgctgcg gcatgcggaa gcatcagcca tcgtggagta cgcatacaat
781 gacaaagcca ttttggagca gaggaacatg ctgacggaag agctctatgg gaacacattt
841 cagctttaca agtcagcaga tcacccaact ctggacaaag tgttagagtt acagccagaa
901 aaattagaac ttattatgga tgaaatgaaa cagattctaa ctccaatggc ccaaaaggaa
961 gctgtgatta agcactcatt ggtgcataaa gtattcttgg acttttttac ctatgcaccc
1021 cccaaactca gatcagaaat gattgaagcc atccgcgaag cggtggtcta cctggcacac
1081 acacacgatg gcgccagagt ggccatgcac tgcctgtggc atggcacgcc caaggacagg
1141 aaagtgattg tgaaaacaat gaagacttat gttgaaaagg tggctaatgg ccaatactcc
1201 catttggttt tactggcggc atttgattgt attgatgata ctaagcttgt gaagcagata
1261 atcatatcag aaattatcag ttcattgcct agcatagtaa atgacaaata tggaaggaag
1321 gtcctattgt acttactaag ccccagagat cctgcacata cagtacgaga aatcattgaa
1381 gttctgcaaa aaggagatgg aaatgcacac agtaagaaag atacagaggt ccgcagacgg
1441 gagctcctag aatccatttc tccagctttg ttaagctacc tgcaagaaca cgcccaagaa
1501 gtggtgctag ataagtctgc gtgtgtgttg gtgtctgaca ttctgggatc tgccactgga
1561 gacgttcagc ctaccatgaa tgccatcgcc agcttggcag caacaggact gcatcctggt
1621 ggcaaggacg gagagcttca cattgcagaa catcctgcag gacatctagt tctgaagtgg
1681 ttaatagagc aagataaaaa gatgaaagaa aatgggagag aaggttgttt tgcaaaaaca
1741 cttgtagagc atgttggtat gaagaacctg aagtcctggg ctagtgtaaa tcgaggtgcc
1801 attattcttt ctagcctcct ccagagttgt gacctggaag ttgcaaacaa agtcaaagct
1861 gcactgaaaa gcttgattcc tacattggaa aaaaccaaaa gcaccagcaa aggaatagaa
1921 attctacttg aaaaactgag cacataggtg gaaagagtta agagcaagat ggaatgattt
1981 tttctgttct ctgttctgtt tcccaatgca gaaaagaagg ggtagggtcc accatactgg
2041 taattggggt actctgtata tgtgtttctt ctttgtatac gaatctattt atataaattg
2101 tttttttaaa tggtcttttt taaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2161 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//