LOCUS BC016004 1863 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens macrophage receptor with collagenous structure, mRNA
(cDNA clone MGC:27263 IMAGE:4618447), complete cds.
ACCESSION BC016004
VERSION BC016004.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1863)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1863)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 38 Row: e Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 56237031.
FEATURES Location/Qualifiers
source 1..1863
/db_xref="H-InvDB:HIT000037442"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:27263 IMAGE:4618447"
/tissue_type="Lung"
/clone_lib="NIH_MGC_77"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1863
/gene="MARCO"
/gene_synonym="SCARA2"
/db_xref="GeneID:8685"
/db_xref="HGNC:HGNC:6895"
/db_xref="MIM:604870"
CDS 137..1699
/gene="MARCO"
/gene_synonym="SCARA2"
/codon_start=1
/product="macrophage receptor with collagenous structure"
/protein_id="AAH16004.1"
/db_xref="GeneID:8685"
/db_xref="HGNC:HGNC:6895"
/db_xref="MIM:604870"
/translation="MRNKKILKEDELLSETQQAAFHQIAMEPFEINVPKPKRRNGVNF
SLAVVVIYLILLTAGAGLLVVQVLNLQARLRVLEMYFLNDTLAAEDSPSFSLLQSAHP
GEHLAQGASRLQVLQAQLTWVRVSHEHLLQRVDNFTQNPGMFRIKGEQGAPGLQGHKG
AMGMPGAPGPPGPPAEKGAKGAMGRDGATGPSGPQGPPGVKGEAGLQGPQGAPGKQGA
TGTPGPQGEKGSKGDGGLIGPKGETGTKGEKGDLGLPGSKGDRGMKGDAGVMGPPGAQ
GSKGDFGRPGPPGLAGFPGAKGDQGQPGLQGVPGPPGAVGHPGAKGEPGSAGSPGRAG
LPGSPGSPGATGLKGSKGDTGLQGQQGRKGESGVPGPAGVKGEQGSPGLAGPKGAPGQ
AGQKGDQGVKGSSGEQGVKGEKGERGENSVSVRIVGSSNRGRAEVYYSGTWGTICDDE
WQNSDAIVFCRMLGYSKGRALYKVGAGTGQIWLDNVQCRGTESTLWSCTKNSWGHHDC
SHEEDAGVECSV"
BASE COUNT 477 a 454 c 617 g 315 t
ORIGIN
1 gggggccaaa gggaagtgct gcgaggttta caaccagctg cagtggttcg atgggaagga
61 tctttctcca agtggttcct cttgagggga gcatttctgc tggctccagg actttggcca
121 tctataaagc ttggcaatga gaaataagaa aattctcaag gaggacgagc tcttgagtga
181 gacccaacaa gctgcttttc accaaattgc aatggagcct ttcgaaatca atgttccaaa
241 gcccaagagg agaaatgggg tgaacttctc cctagctgtg gtggtcatct acctgatcct
301 gctcaccgct ggcgctgggc tgctggtggt ccaagttctg aatctgcagg cgcggctccg
361 ggtcctggag atgtatttcc tcaatgacac tctggcggct gaggacagcc cgtccttctc
421 cttgctgcag tcagcacacc ctggagaaca cctggctcag ggtgcatcga ggctgcaagt
481 cctgcaggcc caactcacct gggtccgcgt cagccatgag cacttgctgc agcgggtaga
541 caacttcact cagaacccag ggatgttcag aatcaaaggt gaacaaggcg ccccaggtct
601 tcaaggccac aagggggcca tgggcatgcc tggtgcccct ggcccgccgg gaccacctgc
661 tgagaaggga gccaaggggg ctatgggacg agatggagca acaggcccct cgggacccca
721 aggcccaccg ggagtcaagg gagaggcggg cctccaagga ccccagggtg ctccagggaa
781 gcaaggagcc actggcaccc caggacccca aggagagaag ggcagcaaag gcgatggggg
841 tctcattggc ccaaaagggg aaactggaac taagggagag aaaggagacc tgggtctccc
901 aggaagcaaa ggggacaggg gcatgaaagg agatgcaggg gtcatggggc ctcctggagc
961 ccaggggagt aaaggtgact tcgggaggcc aggcccacca ggtttggctg gttttcctgg
1021 agctaaagga gatcaaggac aacctggact gcagggtgtt ccgggccctc ctggtgcagt
1081 gggacaccca ggtgccaagg gtgagcctgg cagtgctggc tcccctgggc gagcaggact
1141 tccagggagc cccgggagtc caggagccac aggcctgaaa ggaagcaaag gggacacagg
1201 acttcaagga cagcaaggaa gaaaaggaga atcaggagtt ccaggccctg caggtgtgaa
1261 gggagaacag gggagcccag ggctggcagg tcccaaggga gcccctggac aagctggcca
1321 gaagggagac cagggagtga aaggatcttc tggggagcaa ggagtaaagg gagaaaaagg
1381 tgaaagaggt gaaaactcag tgtccgtcag gattgtcggc agtagtaacc gaggccgggc
1441 tgaagtttac tacagtggta cctgggggac aatttgcgat gacgagtggc aaaattctga
1501 tgccattgtc ttctgccgca tgctgggtta ctccaaagga agggccctgt acaaagtggg
1561 agctggcact gggcagatct ggctggataa tgttcagtgt cggggcacgg agagtaccct
1621 gtggagctgc accaagaata gctggggcca tcatgactgc agccacgagg aggacgcagg
1681 cgtggagtgc agcgtctgac ccggaaaccc tttcacttct ctgctcccga ggtgtcctcg
1741 ggctcatatg tgggaaggca gaggatctct gaggagttcc ctggggacaa ctgagcagcc
1801 tctggagagg ggccattaat aaagctcaac atcaaaaaaa aaaaagaaaa aaaaaaaaaa
1861 aaa
//