LOCUS BC015990 1180 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens GIY-YIG domain containing 2, mRNA (cDNA clone MGC:2631
IMAGE:3503887), complete cds.
ACCESSION BC015990
VERSION BC015990.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1180)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1180)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC015990.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: a Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 30089944.
FEATURES Location/Qualifiers
source 1..1180
/db_xref="H-InvDB:HIT000037435_04"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2631 IMAGE:3503887"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1180
/gene="GIYD2"
/gene_synonym="FLJ23439"
/gene_synonym="MGC2532"
/gene_synonym="MGC5178"
/db_xref="GeneID:79008"
/db_xref="HGNC:HGNC:28748"
CDS 196..1023
/gene="GIYD2"
/gene_synonym="FLJ23439"
/gene_synonym="MGC2532"
/gene_synonym="MGC5178"
/codon_start=1
/product="GIY-YIG domain containing 2"
/protein_id="AAH15990.1"
/db_xref="GeneID:79008"
/db_xref="HGNC:HGNC:28748"
/translation="MGPAGVAARPGRFFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQ
HNGGRKKGGAWRTSGRGPWEMVLVVHGFPSSVAALRFEWAWQHPHASRRLAHVGPRLR
GETAFAFHLRVLAHMLRAPPWARLPLTLRWVRPDLRQDLCLPPPPHVPLAFGPPPPQA
PAPRRRAGPFDDAEPEPDQGDPGACCSLCAQTIQDEEGPLCCPHPGCLLRAHVICLAE
EFLQEEPGQLLPLEGQCPCCEKSLLWGDLIWLCQMDTEKEVEDSELEEAHWTDLLET"
BASE COUNT 244 a 390 c 342 g 204 t
ORIGIN
1 gtcggacttc tacacccgcc tccagacagg agaggggcac gtaccggcgc tacggcttcc
61 tgcaggctgc ctccggatag tccccgagag cttgttccga agcaagcacc ctgcagccct
121 agcgatccag ccctcccctg gaccctaggt cacggcaatc aaccccctgc tgtggttccc
181 gaaccccaag gcccgatggg tcccgcgggg gtcgcggcga ggccagggcg ctttttcggc
241 gtctacctgc tctactgcct gaacccccgg taccggggcc gcgtctacgt ggggttcact
301 gtcaacactg ctcgtcgggt ccagcagcac aatgggggcc gcaaaaaagg cggggcctgg
361 cggaccagcg ggcgagggcc ctgggagatg gtgctcgtcg tgcacggctt cccgtcctcc
421 gtggccgccc ttcggtttga gtgggcttgg cagcacccgc acgcctcgcg ccgcctggcg
481 cacgtggggc ctcgcctgcg aggagagaca gccttcgctt tccacctgcg cgtgctggcg
541 cacatgctgc gcgcaccgcc ctgggctcgc ctcccgctca cgctgcgctg ggtgcgccca
601 gacctccgcc aggacctctg cctcccgccg ccgccgcacg tgcctctggc cttcgggcct
661 ccaccgcccc aggccccggc cccaaggcgc cgcgcaggtc cctttgatga cgcggagcct
721 gagccagacc agggggatcc aggggcctgc tgctccctgt gcgcccagac catccaggat
781 gaagaggggc ccttgtgttg cccccaccct ggctgcctgc taagggccca tgtgatctgc
841 ctggcagagg agtttcttca ggaagaacca gggcagcttc tgcccctaga gggccaatgc
901 ccttgctgtg agaagtcact gctttgggga gacctgatct ggctgtgcca gatggacact
961 gagaaagaag tagaagactc agaattagaa gaggcacact ggacagacct gctggagacc
1021 tgatcctcag tgtccttacc ccctcctacc tcttttctgt gccacctgct gtgggtccag
1081 caggttttta cttgagtaca ataaaaagtc tgagtcaaaa aaaaaaaaaa aaaaaaaaaa
1141 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//