LOCUS BC015953 2421 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens splicing factor, arginine/serine-rich 8
(suppressor-of-white-apricot homolog, Drosophila), mRNA (cDNA clone
IMAGE:3830054), partial cds.
ACCESSION BC015953
VERSION BC015953.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2421)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2421)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC015953.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 14 Row: j Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23111061.
FEATURES Location/Qualifiers
source 1..2421
/db_xref="H-InvDB:HIT000088864"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3830054"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..>2421
/gene="SFRS8"
/gene_synonym="SWAP"
/db_xref="GeneID:6433"
/db_xref="MIM:601945"
CDS 141..>2421
/gene="SFRS8"
/gene_synonym="SWAP"
/codon_start=1
/product="SFRS8 protein"
/protein_id="AAH15953.1"
/db_xref="GeneID:6433"
/db_xref="MIM:601945"
/translation="MYGASGGRAKPERKSGAKEEAGPGGAGGGGSRVELLVFGYACKL
FRDDERALAQEQGQHLIPWMGDHKILIDRYDGRGHLHDLSEYDAEYSTWNRDYQLSEE
EARIEALCDEERYLALHTDLLEEEARQEEEYKRLSEALAEDGSYNAVGFTYGSDYYDP
SEPTEEEEPSKQREKNEAENLEENEEPFVAPLGLSVPSDVELPPTAKMHAIIERTASF
VCRQGAQFEIMLKAKQARNSQFDFLRFDHYLNPYYKFIQKAMKEGRYTVLAENKSDEK
KKSGVSSDNEDDDDEEDGNYLHPSLFASKKCNRLEELMKPLKVVDPDHPLAALVRKAQ
ADSSTPTPHNADGAPVQPSQVEYTADSTVAAMYYSYYMLPDGTYCLAPPPPGIDVTTY
YSTLPAGVTVSNSPGVTTTAPPPPGTTPPPPPTTAETSSGATSTTTTTSALAPVAAII
PPPPDVQPVIDKLAEYVARNGLKFETSVRAKNDQRFEFLQPWHQYNAYYEFKKQFFLQ
KEGGDSMQAVSAPEEAPTDSAPEKPSDAGEDGAPEDAAEVGARAGSGGKKEASSSKTV
PDGKLVKASFAPISFAIKAKENDLLPLEKNRVKLDDDSDDDEESKEGQESSSSAANTN
PAVAPPCVVVEEKKPQLTQEELEAKQAKQKLEDRLAAAAREKLAQASKESKEKQLQAE
RKRKAALFLQTLKNPLPEAEAGKIEESPFSVEESSTTPCPLLTGGRPLPTLEVKPPDR
PSSKSKDPPREEEKEKKKKK"
BASE COUNT 661 a 642 c 692 g 426 t
ORIGIN
1 attttgtggc ccgctatggc ggcggtgttg aggttgggtc cgggatgcgg ggtctttgac
61 tgaaggggta ggccaagtgg aggtatcagg gacgtcgcgc ggcacagaag aggaccagcc
121 tggacgccgg ggacgctgtc atgtacggcg cgagcggggg ccgcgccaaa cccgagagga
181 aaagcggcgc gaaggaggag gccgggccag gcggtgccgg cggtgggggc agccgagtgg
241 agctcttggt tttcggctat gcctgcaagc tgttccggga cgacgagcgg gccctggctc
301 aggaacaggg acagcacctc atcccctgga tgggggacca caagatcctc atcgacagat
361 atgatggacg tggtcacctg catgaccttt ctgagtacga tgctgagtat tccacgtgga
421 acagagatta tcagctgtct gaagaggagg cgcgaataga ggccctgtgt gatgaagaga
481 ggtatttagc cttgcatacg gacttgcttg aggaggaggc aaggcaagag gaagaataca
541 agcgattgag tgaagcacta gcagaggatg ggagctacaa tgccgtgggg ttcacttacg
601 gtagcgacta ttacgacccg tcagagccga cggaggagga ggagccttcc aaacagagag
661 aaaaaaatga ggccgaaaat ttagaggaaa atgaagagcc cttcgttgcc cccttaggat
721 tgagcgtccc gtctgacgtg gagttgccac caaccgctaa aatgcacgcc atcatcgagc
781 gcacggccag cttcgtgtgc aggcagggag cacagtttga gatcatgctg aaggccaagc
841 aggcccggaa ctcccagttt gactttctgc gcttcgacca ctacctcaac ccctactata
901 agttcatcca gaaagccatg aaagagggac gctacactgt cctggcagaa aacaaaagtg
961 acgagaaaaa aaaatcagga gtcagctctg acaatgaaga tgatgatgat gaagaagatg
1021 ggaattacct tcatccctct ctctttgcct ccaagaagtg taaccgcctt gaagagctga
1081 tgaagccctt gaaggtagtg gacccagatc atcccctcgc agcacttgtt cgtaaggcac
1141 aggctgacag ttccactccc accccacaca acgcagacgg tgcgcctgtg cagccctccc
1201 aggtggagta cacggcagac tcgaccgtgg cagccatgta ttacagctac tacatgctac
1261 cggacggcac ttactgcctg gcgccgcccc ctcccggaat cgatgtgact acttactaca
1321 gcacccttcc tgctggcgtg accgtgtcta actcccctgg agtgacgacc accgccccac
1381 cacctcctgg gaccacacca ccaccgcccc caaccacagc agagactagc agcggggcca
1441 cctccacaac caccaccaca agtgcacttg cccccgtggc cgccatcatc cccccgcccc
1501 ccgacgtcca gcccgtgatt gacaagctgg ccgagtatgt cgccaggaac ggcctgaagt
1561 tcgagaccag tgttcgtgcc aagaatgatc aaagatttga gttcctgcag ccgtggcacc
1621 agtataatgc ttattatgag tttaagaagc agttcttcct ccagaaagaa gggggcgata
1681 gcatgcaggc tgtgtctgca ccagaagagg ctcccacaga ctctgctccc gagaagccaa
1741 gtgatgctgg ggaggatggc gcgcctgaag acgcagccga ggtgggagca cgggcaggct
1801 caggcgggaa gaaggaggca tcgtccagta agaccgtccc ggacgggaag ctggtgaaag
1861 cttcctttgc tccaataagc tttgcaatca aggccaaaga aaatgatctg cttcccctgg
1921 aaaaaaatcg tgttaagcta gatgatgaca gtgatgatga tgaagaaagc aaagaaggcc
1981 aagaaagttc tagtagtgct gcaaacacta acccagcagt tgccccaccc tgtgtagttg
2041 ttgaggagaa gaagcctcaa cttacccagg aggagctaga agcaaagcaa gcaaagcaaa
2101 agctggaaga tcgcctcgca gctgctgccc gggaaaagct cgcccaggcg tctaaggagt
2161 caaaagagaa acagcttcaa gcagaacgta aaaggaaagc ggcgttattt ttacagaccc
2221 tcaaaaatcc tctgccggaa gcagaagctg ggaaaattga ggagagtcct ttcagtgtcg
2281 aggaatccag cactacgccc tgccctctac tgactggagg caggcctctg cctactttag
2341 aagttaaacc acccgatagg ccttcgagca aaagcaaaga tccaccgaga gaagaagaga
2401 aagaaaaaaa aaaaaaaaaa a
//