LOCUS BC015943 1328 bp mRNA linear HUM 06-OCT-2003
DEFINITION Homo sapiens dehydrogenase/reductase (SDR family) member 1, mRNA
(cDNA clone MGC:9325 IMAGE:3922816), complete cds.
ACCESSION BC015943
VERSION BC015943.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1328)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1328)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (15-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 15 Row: p Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19923982.
FEATURES Location/Qualifiers
source 1..1328
/db_xref="H-InvDB:HIT000037416"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9325 IMAGE:3922816"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1328
/gene="DHRS1"
/gene_synonym="FLJ25430"
/gene_synonym="MGC20204"
/db_xref="GeneID:115817"
CDS 81..1022
/gene="DHRS1"
/gene_synonym="FLJ25430"
/gene_synonym="MGC20204"
/codon_start=1
/product="DHRS1 protein"
/protein_id="AAH15943.1"
/db_xref="GeneID:115817"
/translation="MAAPMNGQACVVTGASRGIGRGIALQLCKAGATVYITGRHLDTL
RVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILN
TRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYMFN
VPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQ
FKSAFSSAETTELSGKCVVALATDPNILSLSGKVLPSCDLARRYGLRDVDGRPVQDYL
SLSSVLSHVSGLGWLASYLPSFLRVPKWIIALYTSKF"
misc_feature 96..842
/gene="DHRS1"
/gene_synonym="FLJ25430"
/gene_synonym="MGC20204"
/note="adh_short; Region: short chain dehydrogenase. This
family contains a wide variety of dehydrogenases"
/db_xref="CDD:pfam00106"
BASE COUNT 289 a 343 c 357 g 339 t
ORIGIN
1 cagacttcca ccgcagcccc gcaatctgca gacctcagcg gcagcgcagg tggcagacct
61 gcctcctttg cctgtgagtc atggcagctc ccatgaatgg ccaagcgtgt gtggtgactg
121 gtgcctccag gggtattggc cgtggcattg ccttgcagct ctgcaaagca ggcgccacag
181 tttacatcac tggccgccat ctggacaccc ttcgcgttgt tgctcaggag gcacaatccc
241 tcgggggcca atgtgtgcct gtggtgtgcg attcaagcca ggagagtgaa gtgcgaagcc
301 tgtttgagca agtggatcgg gaacagcaag ggcgtctaga tgtgctggtc aacaatgctt
361 atgcaggggt ccagacgatc ctgaacacca ggaataaggc attctgggaa acccctgcct
421 ccatgtggga tgatatcaac aacgtcggac tcagaggcca ctacttttgc tcagtgtatg
481 gggcacggct gatggtacca gctggccagg ggctcatcgt ggtcatctcc tccccaggaa
541 gcctgcagta tatgttcaat gtcccctatg gtgtgggcaa agctgcgtgt gacaagctgg
601 ctgctgactg tgcccacgag ctgcggcgcc atggggtcag ctgtgtgtct ctgtggccgg
661 ggattgtgca gacagaactg ctgaaggagc atatggcaaa ggaggaggtc ctgcaggatc
721 ctgtgttgaa gcagttcaaa tcagccttct catctgcgga aaccacagaa ttgagtggca
781 aatgtgtggt ggctttggca acagatccca atatcctgag cctgagtggt aaggtgctgc
841 catcctgtga ccttgctcga cgctatggcc ttcgggatgt ggacggccgc cccgtccaag
901 actatttgtc tttgagctct gttctctcac acgtgtccgg cctgggctgg ctggcctcct
961 acctgccctc cttcctccgt gtgcccaagt ggattattgc cctctacact agcaagttct
1021 aaccctcctg gtctgacact acgtctctgc ttgtcttctc atttggactt ggtggtttgt
1081 cctgtctcag tgaaacagca gcctttcttg tttacccata cccttgatat gaagagaagc
1141 cctctgctgt gtgtccgtgg tgagttctgg ggtgcgccta ggtcccttct ttgtgccttg
1201 gttttccttg tccttctttt tactttttgc cttagtattg aaaaatgctc ttggagctaa
1261 taaaagtctc atttctcttt aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1321 aaaaaaaa
//