LOCUS BC015910 1246 bp mRNA linear HUM 01-FEB-2005
DEFINITION Homo sapiens membrane-associated ring finger (C3HC4) 2, mRNA (cDNA
clone IMAGE:4640357), partial cds.
ACCESSION BC015910
VERSION BC015910.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1246)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1246)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (15-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: l Column: 23.
FEATURES Location/Qualifiers
source 1..1246
/db_xref="H-InvDB:HIT000088857"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4640357"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1246
/gene="MARCH2"
/gene_synonym="HSPC240"
/gene_synonym="MARCH-II"
/gene_synonym="RNF172"
/db_xref="GeneID:51257"
CDS <1..722
/gene="MARCH2"
/gene_synonym="HSPC240"
/gene_synonym="MARCH-II"
/gene_synonym="RNF172"
/codon_start=3
/product="MARCH2 protein"
/protein_id="AAH15910.1"
/db_xref="GeneID:51257"
/translation="HLPGSLCDCSGSPAFSKVVEATGLGPPQYVAQVTSRDGRLLSTV
IRALDTPSDGPFCRICHEGANGECLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELC
HTEFAVEKRPRPLTEWLKDPGPRTEKRTLCCDMVCFLFITPLAAISGWLCLRGAQDHL
RLHSQLEAVGLIALTIALFTIYVLWTLVSFRYHCQLYSEWRKTNQKVRLKIREADSPE
GPQHSPLAAGLLKKVAEETPV"
BASE COUNT 284 a 367 c 337 g 258 t
ORIGIN
1 gccacctccc cggctccctg tgtgactgct ccggcagccc tgccttctcc aaggtcgtgg
61 aggctacggg cctcggaccg ccccagtatg tggcacaggt gacttcaagg gatggccggc
121 tcctctccac cgtcatccgt gccttggaca caccgagtga tggtcctttc tgccggatct
181 gccatgaggg agcgaacggg gagtgcttgc tgtccccgtg tggctgcacc ggcacgctgg
241 gtgccgtgca taagagctgt ctggagaagt ggctttcctc atctaacacc agctactgcg
301 agctgtgcca cacggagttt gcagtggaga aacggcctcg acccctcaca gagtggctga
361 aggacccggg gccgcggacg gagaagcgga cactgtgctg cgacatggtg tgtttcctgt
421 tcatcacacc gctggccgcc atctcaggct ggttgtgcct gcgcggggcc caggaccacc
481 tccggctcca cagccagctg gaggccgtgg gtctcattgc cctcaccatc gccctcttca
541 ccatctatgt cctctggacg ctggtctcct tccgctacca ctgccagctg tactccgagt
601 ggagaaagac caaccagaaa gttcgcctga agatccggga ggcggacagc cccgagggcc
661 cccagcattc tccactggca gctggactcc tgaagaaggt ggcagaggag acaccagtat
721 gaatgctggg ctctccggac cctgcagcag agaggccaga ggtagctggt gataccctgt
781 cctgtggaag gacttccact tcaacacttc cacttcaaca gttcccgcac ggcctgaacg
841 cttcttaggc caagagacac catgcggagc ctagtctgtg atcctgtgtg aagatatttt
901 cagggttttt tttgtttttt tttttgcata tggaggacag gtggacatgg tcctgagctc
961 tggacggagc aggcaccctg atctcattct gaggtccaca tggcaccttc tgggccagca
1021 gctgtggccg gtgtatcaag ggcgccctta aagctggaac attccagcaa gcttcttgcg
1081 cttctctgca cccggcaggc ccactttcct ggcaccctcg actttatata aaagttgcac
1141 tgcgtttcaa aaacccaccc ctgaatgaat aaaaggagcc ctggctggac aaaaaaaaaa
1201 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//