LOCUS BC015883 1582 bp mRNA linear HUM 22-FEB-2007
DEFINITION Homo sapiens tubulin, alpha 1b, mRNA (cDNA clone MGC:10192
IMAGE:3909374), complete cds.
ACCESSION BC015883
VERSION BC015883.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1582)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1582)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC015883.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 15 Row: f Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, Similarity but not identity to protein.
FEATURES Location/Qualifiers
source 1..1582
/db_xref="H-InvDB:HIT000037375"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10192 IMAGE:3909374"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1582
/gene="TUBA1B"
/gene_synonym="K-ALPHA-1"
/db_xref="GeneID:10376"
/db_xref="HGNC:HGNC:18809"
/db_xref="MIM:602530"
CDS 40..1395
/gene="TUBA1B"
/gene_synonym="K-ALPHA-1"
/codon_start=1
/product="tubulin, alpha 1b"
/protein_id="AAH15883.1"
/db_xref="GeneID:10376"
/db_xref="HGNC:HGNC:18809"
/db_xref="MIM:602530"
/translation="MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGG
GDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANN
YARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVD
YGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD
IERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVI
SAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAT
IKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD
HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDSVEGEGEEEGEE
Y"
BASE COUNT 368 a 432 c 387 g 395 t
ORIGIN
1 tctgctcctg tcgccttcgc ctcctaatcc ctagccacta tgcgtgagtg catctccatc
61 cacgttggcc aggctggtgt ccagattggc aatgcctgct gggagctcta ctgcctggaa
121 cacggcatcc agcccgatgg ccagatgcca agtgacaaga ccattggggg aggagatgac
181 tccttcaaca ccttcttcag tgagacgggc gctggcaagc acgtgccccg ggctgtgttt
241 gtagacttgg aacccacagt cattgatgaa gttcgcactg gcacctaccg ccagctcttc
301 caccctgagc agctcatcac aggcaaggaa gatgctgcca ataactatgc ccgagggcac
361 tacaccattg gcaaggagat cattgacctt gtgttggacc gaattcgcaa gctggctgac
421 cagtgcaccg gtcttcaggg cttcttggtt ttccacagct ttggtggggg aactggttct
481 gggttcacct ccctgctcat ggaacgtctc tcagttgatt atggcaagaa gtccaagctg
541 gagttctcca tttacccagc accccaggtt tccacagctg tagttgagcc ctacaactcc
601 atcctcacca cccacaccac cctggagcac tctgattgtg ccttcatggt agacaatgag
661 gccatctatg acatctgtcg tagaaacctc gatatcgagc gcccaaccta cactaacctt
721 aaccgcctta ttagccagat tgtgtcctcc atcactgctt ccctgagatt tgatggagcc
781 ctgaatgttg acctgacaga attccagacc aacctggtgc cctacccccg catccacttc
841 cctctggcca catatgcccc tgtcatctct gctgagaaag cctaccatga acagctttct
901 gtagcagaga tcaccaatgc ttgctttgag ccagccaacc agatggtgaa atgtgaccct
961 cgccatggta aatacatggc ttgctgcctg ttgtaccgtg gtgacgtggt tcccaaagat
1021 gtcaatgctg ccattgccac catcaaaacc aagcgcagca tccagtttgt ggattggtgc
1081 cccactggct tcaaggttgg catcaactac cagcctccca ctgtggtgcc tggtggagac
1141 ctggccaagg tacagagagc tgtgtgcatg ctgagcaaca ccacagccat tgctgaggcc
1201 tgggctcgcc tggaccacaa gtttgacctg atgtatgcca agcgtgcctt tgttcactgg
1261 tacgtgggtg aggggatgga ggaaggcgag ttttcagagg cccgtgaaga tatggctgcc
1321 cttgagaagg attatgagga ggttggtgtg gattctgttg aaggagaggg tgaggaagaa
1381 ggagaggaat actaattatc cattcctttt ggccctgcag catgtcatgc tcccagaatt
1441 tcagcttcag cttaactgac agacgttaaa gctttctggt tagattgttt tcacttggtg
1501 atcatgtctt ttccatgtgt acctgtaata tttttccatc atatctcaaa gtaaagtcat
1561 taacatcaaa aaaaaaaaaa aa
//