LOCUS BC015795 2142 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 9 open reading frame 6, mRNA (cDNA clone
MGC:8859 IMAGE:3910513), complete cds.
ACCESSION BC015795
VERSION BC015795.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2142)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2142)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 15 Row: g Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20127565.
FEATURES Location/Qualifiers
source 1..2142
/db_xref="H-InvDB:HIT000037329"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8859 IMAGE:3910513"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2142
/gene="C9orf6"
/gene_synonym="CG-8"
/gene_synonym="FLJ20457"
/db_xref="GeneID:54942"
/db_xref="HGNC:HGNC:1364"
CDS 307..852
/gene="C9orf6"
/gene_synonym="CG-8"
/gene_synonym="FLJ20457"
/codon_start=1
/product="chromosome 9 open reading frame 6"
/protein_id="AAH15795.1"
/db_xref="GeneID:54942"
/db_xref="HGNC:HGNC:1364"
/translation="MATEPEAAEPVVPSLVDRYFTRWYKPDVKGKFCEDHCILQHSNR
ICVITLAESHPVLQSGKTIKSISYQISTNCSRLQNKVSGKFKRGAQFLTELAPLCKIY
CSDGEEYTVSSCVRGRLMEVNENILHKPSILQEKPSTEGYIAVVLPKFEESKSITEGL
LTQKQYEEVMVKRINATTATS"
BASE COUNT 655 a 466 c 457 g 564 t
ORIGIN
1 cttacggcgg ccggccttct ttgtaggcct ggcaccgtag aggtagagga gctacattgg
61 ccgcgtcccc tgtccctctg ccctcttgcc catctgccca aacttttgta tttgatctct
121 gttttgatgt cgaaccccaa agcactgtaa ttgggggggg cggggggggt ggtggaacct
181 gcggacctga gagcagcgcg cgtgcgcacg acacgcgctg tgcgccggaa gagcacgccc
241 agtccgggct gcgcggagga agcgctgggg tcccggaggg cgggggtggc ggcgccggag
301 gtcgccatgg ctaccgagcc cgaagccgcg gagccggtgg tgccttcgct cgtggatcga
361 tacttcactc gctggtacaa accggatgtc aaaggaaaat tttgtgagga ccactgtata
421 ctacagcact ctaaccgaat atgtgtcatc acattggcag aatctcatcc agttcttcaa
481 agtggaaaaa caattaaaag catttcctat cagatcagta ccaactgtag cagacttcag
541 aacaaggtct ctgggaaatt taagcggggg gcacagtttc taacagagct tgcacctctc
601 tgtaagattt actgctcaga tggtgaagaa tatactgtgt ctagttgtgt tagaggacgt
661 ttgatggaag tgaatgaaaa catcctccat aagccatcta ttcttcaaga aaagccatct
721 actgaaggct acattgcagt tgtgttaccc aaatttgaag aaagtaaaag cataacagaa
781 gggttactga cacaaaaaca atatgaagaa gtcatggtga aacgcattaa tgccacaaca
841 gctacgtcat gaggattgac atggaacaaa aagcaaagtg ggattcttgt tacctggcct
901 aaaccatcag ggtactaaag gagaagaacc agtatatgta aagcatacct aacagccagc
961 catatgcagg ggaggcctag tgcttcactt agttttccct ctctgtcttc ataatgagcc
1021 ttggttccca tttgtctaca gcctgccaga tctggcctgc ccatgtactc acactgttct
1081 cttgcatctc tctaacaact ggcatgcaag gcatgttttt ctgattaaaa acaaacaaag
1141 ctctttgaag aagatttaga aaatacagaa gagttttaag tagccaagta aaaataattt
1201 acccatcatc ccataatcca gaagtaaata catttgaccc ttgagcaaca taggtttgaa
1261 ctgcaagggt ccacttatgc atggactatt ttcaactata aacgagtcaa aaatatatca
1321 atcattaacc aaacacgaaa cccacttata gagcaggttc atatactcag gttccaaagg
1381 gccaactgca ggacttgagt tctcacgtat ggatttgggt atatgtggaa gttcctggaa
1441 ccaatcccct atgtaaacca agggataact actacatttt aacctacttc tgtttgaaca
1501 tatggtatgg ttattgcttt tgcctcgttt tcctaacagt ttgaagttta aaaaaaccta
1561 acccaccttt cttacccagt cttctataat gtgcctacca aaaagcctag tcctagccca
1621 tctgcctcaa ctcctctccc ttttaggttg tagggaagag gccggagtgt agagtatatt
1681 atatcttctg tcccccttat gccaacaaga tggccttccc ctctgaaaca aagtaaaact
1741 gcaacactgt gacttcttaa atgagggata tgtgaaaagg ctatgaaaaa tacaaaggct
1801 ttcctaggaa atgtgttata atgcagcggg aagctaattc ttgaaatatg cacattatag
1861 ttactcagtc tcacatactc tagttactgg caaagaagtt actgagaata tgtcattcaa
1921 aggcataggg gcctttgaat ggaacaaatg ctttcacatc atttaaagta aaaaaaaaac
1981 ctccaacaac tgtgaattta tagtttaaga gtgatttaca ctgaatttca aataaaagga
2041 ctataaaacg tgttattttt ctgtaagggc tataacatac atgtcaatat cactgttttt
2101 aaataaaata tacttttata cagaagaaaa aaaaaaaaaa aa
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