LOCUS BC015770 1755 bp mRNA linear HUM 04-NOV-2003
DEFINITION Homo sapiens solute carrier family 39 (zinc transporter), member
14, mRNA (cDNA clone MGC:23235 IMAGE:4865469), complete cds.
ACCESSION BC015770
VERSION BC015770.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1755)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1755)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 34 Row: i Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, GenomeScan gene prediction.
FEATURES Location/Qualifiers
source 1..1755
/db_xref="H-InvDB:HIT000037313"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:23235 IMAGE:4865469"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1755
/gene="SLC39A14"
/gene_synonym="KIAA0062"
/db_xref="GeneID:23516"
CDS 138..1583
/gene="SLC39A14"
/gene_synonym="KIAA0062"
/codon_start=1
/product="SLC39A14 protein"
/protein_id="AAH15770.1"
/db_xref="GeneID:23516"
/translation="MKLLLLHPAFQSCLLLTLLGLWRTTPEAHASSPGAPAISAASFL
QDLIHRYGEGDSLTLQQLKALLNHLDVGVGRGNVTQHVQGHRNLSTCFSSGDLFTAHN
FSEQSRIGSSELQEFCPTILQQLDSRACTSENQENEENEQTEEGRPSAVEVWGYGLLC
VTVISLCSLLGASVVPFMKKTFYKRLLLYFIALAIGTLYSNALFQLIPEAFGFNPLED
YYVSKSAVVFGGFYLFFFTEKILKILLKQKNEHHHGHSHYASESLPSKKDQEEGVMEK
LQNGDLDHMIPQHCSSELDGKAPMVDEKVIVGSLSVQDLQASQSACYWLKGVRYSDIG
TLAWMITLSDGLHNFIDGLAIGASFTVSVFQGISTSVAILCEEFPHELGDFVILLNAG
MSIQQALFFNFLSACCCYLGLAFGILAGSHFSANWIFALAGGMFLYISLADMMEFCSV
AQAGVQWCHLSSLQPLPLGLKRLSCLSLPSN"
misc_feature 588..1472
/gene="SLC39A14"
/gene_synonym="KIAA0062"
/note="Zip; Region: ZIP Zinc transporter. The ZIP family
consists of zinc transport proteins and many putative
metal transporters. The main contribution to this family
is from the Arabidopsis thaliana ZIP protein family these
proteins are responsible for zinc uptake in the plant.
Also found within this family are C. elegans proteins of
unknown function which are annotated as being similar to
human growth arrest inducible gene product, although this
protein in not found within this family"
/db_xref="CDD:pfam02535"
BASE COUNT 381 a 480 c 460 g 434 t
ORIGIN
1 cagtgagggg ggtcggcgcg cgtgtctacg cggacgcacc ggctaagctg cttctgccgc
61 cgccggccgc ctgggacctt gcggtgaggc tgcgcggggc cgaggccgcc tccgagcgcc
121 aggtttattc agtcaccatg aagctgctgc tgctgcaccc ggccttccag agctgcctcc
181 tgctgaccct gcttggctta tggagaacca cccctgaggc tcacgcttca tccccgggtg
241 caccagctat cagcgctgcc tccttcctgc aggatctaat acatcggtat ggcgagggtg
301 acagcctcac tctgcagcag ctgaaggccc tgctcaacca cctggatgtg ggagtgggcc
361 ggggtaatgt cacccagcac gtgcaaggac acaggaacct ctccacgtgc tttagttctg
421 gagacctctt cactgcccac aatttcagcg agcagtcgcg gattgggagc agcgagctcc
481 aggagttctg ccccaccatc ctccagcagc tggattcccg ggcctgcacc tcggagaacc
541 aggaaaacga ggagaatgag cagacggagg aggggcggcc aagcgctgtt gaagtgtggg
601 gatacggtct cctctgtgtg accgtcatct ccctctgctc cctcctgggg gccagcgtgg
661 tgcccttcat gaagaagacc ttttacaaga ggctgctgct ctacttcata gctctggcga
721 ttggaaccct ctactccaac gccctcttcc agctcatccc ggaggcattt ggtttcaacc
781 ctctggaaga ttattatgtc tccaagtctg cagtggtgtt tgggggcttt tatcttttct
841 ttttcacaga gaagatcttg aagattcttc ttaagcagaa aaatgagcat catcatggac
901 acagccatta tgcctctgag tcgcttccct ccaagaagga ccaggaggag ggggtgatgg
961 agaagctgca gaacggggac ctggaccaca tgattcctca gcactgcagc agtgagctgg
1021 acggcaaggc gcccatggtg gacgagaagg tcattgtggg ctcgctctct gtgcaggacc
1081 tgcaggcttc ccagagtgct tgctactggc tgaaaggtgt ccgctactct gatatcggca
1141 ctctggcctg gatgatcact ctgagcgacg gcctccataa tttcatcgat ggcctggcca
1201 tcggtgcttc cttcactgtg tcagttttcc aaggcatcag cacctcggtg gccatcctct
1261 gtgaggagtt cccacatgag ctaggagact ttgtcatcct gctcaacgct gggatgagca
1321 tccaacaagc tctcttcttc aacttccttt ctgcctgctg ctgctacctg ggtctggcct
1381 ttggcatcct ggccggcagc cacttctctg ccaactggat ttttgcgcta gctggaggaa
1441 tgttcttgta tatttctctg gctgatatga tggagttttg ctctgttgcc caggctggag
1501 tgcaatggtg ccatctcagc tcactgcaac ctctgccgct tgggttgaag cgattatcct
1561 gtctaagcct cccgagtaac tgagccagcc atgtttgtta ataaaaatgg ggacaatact
1621 gtatatatat ggttatattt tagctttttc acttttcagt atctcctgag gcttttctca
1681 tgtcattaaa tatttttcta atttaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1741 aaaaaaaaaa aaaaa
//