LOCUS BC015758 3818 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens superkiller viralicidic activity 2-like (S. cerevisiae), mRNA (cDNA clone MGC:23108 IMAGE:4874270), complete cds. ACCESSION BC015758 VERSION BC015758.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3818) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3818) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (09-OCT-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 34 Row: m Column: 11 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 67782310. FEATURES Location/Qualifiers source 1..3818 /db_xref="H-InvDB:HIT000037301_09" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:23108 IMAGE:4874270" /tissue_type="Eye, normal, pigmented retinal epithelium" /clone_lib="NIH_MGC_43" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..3818 /gene="SKIV2L" /gene_synonym="170A" /gene_synonym="DDX13" /gene_synonym="HLP" /gene_synonym="SKI2" /gene_synonym="SKI2W" /db_xref="GeneID:6499" /db_xref="HGNC:HGNC:10898" /db_xref="MIM:600478" CDS 3..3743 /gene="SKIV2L" /gene_synonym="170A" /gene_synonym="DDX13" /gene_synonym="HLP" /gene_synonym="SKI2" /gene_synonym="SKI2W" /codon_start=1 /product="superkiller viralicidic activity 2-like (S. cerevisiae)" /protein_id="AAH15758.1" /db_xref="GeneID:6499" /db_xref="HGNC:HGNC:10898" /db_xref="MIM:600478" /translation="MMETERLVLPPPDPLDLPLRAVELGCTGHWELLNLPGAPESSLP HGLPPCAPDLQQEAEQLFLSSPAWLPLHGVEHSARKWQRKTDPWSLLAVLGAPVPSDL QAQRHPTTGQILGYKEVLLENTNLSATTSLSLRRPPGPASQSLWGNPTRYPFWPGGMD EPTITDLNTREEAEEEIDFEKDLLTIPPGFKKGMDFAPKDCPTPAPGLLSLSCLLEPL DLGGGDEDENEAVGQPGGPRGDTVSASPCSAPLARASSLEDLVLKEASTAVSTPEAPE PPSQEQWAIPVDATSPVGDFYRLIPQPAFQWAFEPDVFQKQAILHLERHDSVFVAAHT SAGKTVVAEYAIALAQKHMTRTIYTSPIKALSNQKFRDFRNTFGDVGLLTGDVQLHPE ASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVHYINDVERGVVWEEVLIMLPDHVSI ILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVPLEHYLFTGNSSKTQGELFLLLD SRGAFHTKGYYAAVEAKKERMSKHAQTFGAKQPTHQGGPAQDRGVYLSLLASLRTRAQ LPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLARLRGSDRQLPQVLHM SELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSMR KHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPEMADLHRMMMGKPSQL QSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSKAHEQALAELTKRLGALEE PDMTGQLVDLPEYYSWGEELTETQHMIQRRIMESVNGLKSLSAGRVVVVKNQEHHNAL GVILQVSSNSTSRVFTTLVLCDKPLSQDPQDRGPATAEVPYPDDLVGFKLFLPEGPCD HTVVKLQPGDMAAITTKVLRVNGEKILEDFSKRQQPKFKKDPPLAAVTTAVQELLRLA QAHPAGPPTLDPVNDLQLKDMSVVEGGLRARKLEELIQGAQCVHSPRFPAQYLKLRER MQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEVGTVKLAGRVACAMSSHE LLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQLPNTLKQGIERVRAVAKRIG EVQVACGLNQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCIQRLA EMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLYTQ" BASE COUNT 832 a 1097 c 1108 g 781 t ORIGIN 1 ggatgatgga gacagagcga cttgtgctac cccctccaga tcccctggac ctaccccttc 61 gggccgtgga gctcggatgc acggggcact gggagctgct gaacttgcct ggagctccag 121 agagtagcct tccccatggc ctccctcctt gtgccccaga tctgcagcaa gaagcagaac 181 agttgtttct gtcatcccca gcctggctgc ctctgcatgg tgtggagcac tcagcccgaa 241 aatggcagag gaagacggat ccctggtctc ttttggctgt gctgggagcc ccagtcccat 301 ccgacctaca ggcccaaaga cacccaacca caggccagat actgggttac aaagaggtct 361 tgctggagaa cacaaatctc tcggctacaa cctccttgtc tcttcgccgg cctccagggc 421 cagcctccca gtccttatgg ggaaatccaa ctcggtatcc cttctggcca ggggggatgg 481 atgaacccac cataacagat ctgaacacac gggaggaggc tgaggaggag atagactttg 541 agaaagatct tcttactatt ccacctggtt tcaagaaagg catggacttt gcaccaaaag 601 attgtccaac tccagctcct ggactactaa gccttagctg tctgttggag cctctggatt 661 tgggtggggg tgacgaggat gagaatgagg cagtgggaca gccaggaggt cccagagggg 721 acactgtttc agcctctccc tgcagtgctc ccctggcccg agcaagcagc ttggaagacc 781 tagtgttgaa ggaagcgtcc acagctgtat ccaccccaga ggccccagag cctccatctc 841 aggagcagtg ggccatccct gtggacgcca cctcccctgt tggtgatttc tatcgcctca 901 ttccccagcc agccttccag tgggcatttg agccagatgt gtttcagaaa caggccatcc 961 tgcacttgga acggcatgac tctgtctttg tcgcagctca cacatctgca ggaaaaacag 1021 ttgtggctga atatgccatt gccctggccc agaaacacat gacacgcacc atctacactt 1081 cgcccatcaa ggccctgagc aaccagaagt tccgggactt ccgaaacaca ttcggggatg 1141 tggggctgct caccggggat gtacagctgc atccggaggc ctcctgcctc atcatgacca 1201 cagagatcct tcgctccatg ctgtacagtg gctcagatgt tattcgggac ctggagtggg 1261 tcatctttga tgaggttcac tatatcaacg atgtcgagcg tggggtcgtg tgggaggagg 1321 tgcttatcat gctacctgac cacgtttcta tcatccttct gagtgccacc gtccccaacg 1381 cccttgagtt tgctgactgg attgggcggc tgaagcgtcg tcagatctat gtgattagca 1441 ctgtaacccg ccccgtgccc ctggagcact atcttttcac agggaacagc tccaagaccc 1501 agggggagct ctttttgttg ctggactccc gaggagcctt ccatacaaaa gggtactatg 1561 cagctgtgga ggccaagaag gagagaatga gcaaacacgc ccagaccttt ggggccaagc 1621 agcccacaca tcaggggggc cctgcacagg accgcggagt gtacctgtcc ctcctggcct 1681 ccctccgcac acgtgcccag ttgcccgtgg tggtgttcac cttctcccgg ggccgctgtg 1741 atgagcaggc ctcaggcctc acctcccttg acctcaccac cagttcggag aagagcgaga 1801 tccacctctt cctgcagcgc tgccttgctc gcctccgtgg ctctgaccgc cagctgcccc 1861 aggtcctgca catgtcagag ctcctgaatc gcggcctggg tgtgcaccat agcggcatcc 1921 tgcccatcct caaggagatc gtggagatgc tcttcagccg tggcctggtc aaggtcttgt 1981 ttgccacaga gacctttgcc atgggagtaa acatgcctgc tcgtacagta gtgtttgact 2041 ccatgcgcaa acacgatggc tccaccttcc gggacctgct ccctggggag tatgtgcaga 2101 tggcaggccg ggcagggcgg aggggcctgg accccacagg caccgttatc ctgctctgca 2161 agggccgagt gcccgagatg gcagacctgc accgcatgat gatggggaag ccgtcccagc 2221 tgcagtccca gttccgcctc acgtacacta tgatcctcaa cttgctgcga gtggatgccc 2281 tcagggtgga ggacatgatg aagaggagct tctctgagtt tccctcccgc aaagacagca 2341 aggcccatga acaggccctg gctgaactga ccaagaggct gggagctttg gaggagcctg 2401 acatgactgg ccaactggtc gacctgcctg aatattacag ctggggggag gaactgacag 2461 agacccagca catgatccag cgacgcatca tggagtctgt gaacgggctg aagtctctct 2521 cagcaggaag ggtggtggtt gtgaagaatc aggagcatca caacgcattg ggagtgatcc 2581 tacaggtctc ctcgaactcc accagcagag tattcacaac cctggtcttg tgtgataagc 2641 ccttgtccca ggacccacag gacagggggc cagccactgc agaggtgccc tatccagatg 2701 acctcgtggg attcaagctg ttcctgcctg aagggccttg tgaccacacc gtggtcaagc 2761 tccagccagg agatatggct gccatcacca ccaaggtgct ccgggtgaat ggggagaaga 2821 tcttggagga cttcagcaag aggcagcagc caaaattcaa gaaggatcct ccccttgcag 2881 ccgtgaccac tgctgtccag gaactgctgc gtctggctca ggcccaccca gccggacctc 2941 ccaccctcga ccctgtcaat gacctgcagc tcaaagatat gtcagttgta gagggtgggc 3001 tccgggcccg gaagctggag gagctgatcc agggggctca gtgtgtacac agcccccgtt 3061 ttcctgccca gtacctgaag ctgcgggagc gaatgcagat acagaaggag atggagcggc 3121 tgcgcttcct actgtcggat cagtcattgc tgctgcttcc tgagtaccat cagcgagtag 3181 aggtgctccg aaccctgggt tacgtggacg aggtgggcac tgtgaagctg gcagggcggg 3241 tggcttgtgc catgagcagc catgagttgc tcctcactga gctcatgttt gacaatgcac 3301 tgagcaccct gcggcctgag gagattgctg ccttgctctc tggcctggtc tgccagagcc 3361 ctggggacgc tggggatcag ctcccaaaca ccctcaagca gggaatagaa cgtgtccggg 3421 ctgtggccaa gcggattggt gaggtccagg tggcttgtgg cctgaaccag acggtggagg 3481 aatttgtggg ggagctgaat tttgggctgg ttgaggttgt atatgagtgg gcccggggca 3541 tgcccttctc cgagttggca gggctctcag ggacccctga gggcctggtg gtccgctgca 3601 ttcagcgcct ggctgagatg tgtcgctcac tgcggggggc agcccgcctg gtaggagagc 3661 ctgtgctggg tgccaagatg gagacagcgg ctaccttgct acggcgggac atcgtatttg 3721 cggccagcct ctacacccag tgaatgcccc atgtaaaaac atgatgataa aacagcaaaa 3781 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa //