LOCUS BC015752 2235 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens interferon regulatory factor 4, mRNA (cDNA clone MGC:23069 IMAGE:4861223), complete cds. ACCESSION BC015752 VERSION BC015752.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2235) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2235) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (09-OCT-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 34 Row: g Column: 16 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4505286. FEATURES Location/Qualifiers source 1..2235 /db_xref="H-InvDB:HIT000037296" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:23069 IMAGE:4861223" /tissue_type="Skin, melanotic melanoma, high MDR." /clone_lib="NIH_MGC_49" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2235 /gene="IRF4" /gene_synonym="LSIRF" /db_xref="GeneID:3662" /db_xref="HGNC:HGNC:6119" /db_xref="MIM:601900" CDS 74..1429 /gene="IRF4" /gene_synonym="LSIRF" /codon_start=1 /product="interferon regulatory factor 4" /protein_id="AAH15752.1" /db_xref="GeneID:3662" /db_xref="HGNC:HGNC:6119" /db_xref="MIM:601900" /translation="MNLEGGGRGGEFGMSAVSCGNGKLRQWLIDQIDSGKYPGLVWEN EEKSIFRIPWKHAGKQDYNREEDAALFKAWALFKGKFREGIDKPDPPTWKTRLRCALN KSNDFEELVERSQLDISDPYKVYRIVPEGAKKGAKQLTLEDPQMSMSHPYTMTTPYPS LPAQQVHNYMMPPLDRSWRDYVPDQPHPEIPYQCPMTFGPRGHHWQGPACENGCQVTG TFYACAPPESQAPGVPTEPSIRSAEALAFSDCRLHICLYYREILVKELTTSSPEGCRI SHGHTYDASNLDQVLFPYPEDNGQRKNIEKLLSHLERGVVLWMAPDGLYAKRLCQSRI YWDGPLALCNDRPNKLERDQTCKLFDTQQFLSELQAFAHHGRSLPRFQVTLCFGEEFP DPQRQRKLITAHVEPLLARQLYYFAQQNSGHFLRGYDLPEHISNPEDYHRSIRHSSIQ E" BASE COUNT 559 a 592 c 605 g 479 t ORIGIN 1 ctccgagtcc agggcgagtg cagagcagag cgggcggagg accccgggcg cgggcgcgga 61 cggcacgcgg ggcatgaacc tggagggcgg cggccgaggc ggagagttcg gcatgagcgc 121 ggtgagctgc ggcaacggga agctccgcca gtggctgatc gaccagatcg acagcggcaa 181 gtaccccggg ctggtgtggg agaacgagga gaagagcatc ttccgcatcc cctggaagca 241 cgcgggcaag caggactaca accgcgagga ggacgccgcg ctcttcaagg cttgggcact 301 gtttaaagga aagttccgag aaggcatcga caagccggac cctcccacct ggaagacgcg 361 cctgcggtgc gctttgaaca agagcaatga ctttgaggaa ctggttgagc ggagccagct 421 ggacatctca gacccgtaca aagtgtacag gattgttcct gagggagcca aaaaaggagc 481 caagcagctc accttggagg acccgcagat gtccatgagc cacccctaca ccatgacaac 541 gccttaccct tcgctcccag cccagcaggt tcacaactac atgatgccac ccctcgaccg 601 aagctggagg gactacgtcc cggatcagcc acacccggaa atcccgtacc aatgtcccat 661 gacgtttgga ccccgcggcc accactggca aggcccagct tgtgaaaatg gttgccaggt 721 gacaggaacc ttttatgctt gtgccccacc tgagtcccag gctcccggag tccccacaga 781 gccaagcata aggtctgccg aagccttggc gttctcagac tgccggctgc acatctgcct 841 gtactaccgg gaaatcctcg tgaaggagct gaccacgtcc agccccgagg gctgccggat 901 ctcccatgga catacgtatg acgccagcaa cctggaccag gtcctgttcc cctacccaga 961 ggacaatggc cagaggaaaa acattgagaa gctgctgagc cacctggaga ggggcgtggt 1021 cctctggatg gcccccgacg ggctctatgc gaaaagactg tgccagagca ggatctactg 1081 ggacgggccc ctggcgctgt gcaacgaccg gcccaacaaa ctggagagag accagacctg 1141 caagctcttt gacacacagc agttcttgtc agagctgcaa gcgtttgctc accacggccg 1201 ctccctgcca agattccagg tgactctatg ctttggagag gagtttccag accctcagag 1261 gcaaagaaag ctcatcacag ctcacgtaga acctctgcta gccagacaac tatattattt 1321 tgctcaacaa aacagtggac atttcctgag gggctacgat ttaccagaac acatcagcaa 1381 tccagaagat taccacagat ctatccgcca ttcctctatt caagaatgaa aaatgtcaag 1441 atgagtggtt ttctttttcc tttttttttt ttttttgata cggagatacg gggtcttgct 1501 ctgtctccca ggctggagtg cagtgacaca atctcagctc actgtgacct ccgcctcctg 1561 ggttcaagag actctcctgc ctcagcctcc ctggtagctg ggattacagg tgtgagccac 1621 tgcacccacc caagacaagt gattttcatt gtaaatattt gactttagtg aaagcgtcca 1681 attgactgcc ctcttactgt tttgaggaac tcagaagtgg agatttcagt tcagcggttg 1741 aggagaattg cggcgagaca agcatggaaa atcagtgaca tctgattggc agatgagctt 1801 atttcaaaag gaagggtggc tttgcatttc ttgtgttcta tagactgcca tcattgatga 1861 tcactgtgaa aattgaccaa gtgatgtgtt tacatttact gaaatgcgct ctttaatttg 1921 ttgtagatta ggtcttgctg gaagacagag aaaacttgcc tttcagtatt gacactgact 1981 agagtgatga ctgcttgtag gtatgtctgt gccatttctc agggaagtaa gatgtaaatt 2041 gaagaagcct cacacgtaaa agaaatgtat taacgtatgt aggagctgca gttcttgtgg 2101 aagacacttg ctgagtgaag gaaatgaatc tttgactgaa gccgtgcctg tagccttggg 2161 gaggcccatc ccccacctgc cagcggtttc ctggtgtggg tccctctgct ccctctgaaa 2221 aaaaaaaaaa aaaaa //