LOCUS BC015714 2831 bp mRNA linear HUM 15-FEB-2005
DEFINITION Homo sapiens PHD finger protein 21A, mRNA (cDNA clone MGC:16851
IMAGE:3908900), complete cds.
ACCESSION BC015714
VERSION BC015714.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2831)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2831)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC015714.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 15 Row: e Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, GenomeScan gene prediction, Similarity but not identity
to protein.
FEATURES Location/Qualifiers
source 1..2831
/db_xref="H-InvDB:HIT000037270"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:16851 IMAGE:3908900"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2831
/gene="PHF21A"
/gene_synonym="BHC80"
/gene_synonym="BM-006"
/gene_synonym="KIAA1696"
/db_xref="GeneID:51317"
/db_xref="MIM:608325"
CDS 289..2331
/gene="PHF21A"
/gene_synonym="BHC80"
/gene_synonym="BM-006"
/gene_synonym="KIAA1696"
/codon_start=1
/product="PHF21A protein"
/protein_id="AAH15714.1"
/db_xref="GeneID:51317"
/db_xref="MIM:608325"
/translation="MELQTLQEALKVEIQVHQKLVAQMKQDPQNADLKKQLHELQAKI
TALSEKQKRVVEQLRKNLIVKQEQPDKFQIQPLPQSENKLQTAQQQPLQQLQQQQQYH
HHHAQQSAAASPNLTASQKTVTTASMITTKTLPLVLKAATATMPASVVGQRPTIAMVT
AINSQKAVLSTDVQNTPVNLQTSSKVTGPGAEAVQIVAKNTVTLVQATPPQPIKVPQF
IPPPRLTPRPNFLPQVRPKPVAQNNIPIAPAPPPMLAAPQLIQRPVMLTKFTPTTLPT
SQNSIHPVRVVNGQTATIAKTFPMAQLTSIVIATPGTRLAGPQTVQLSKPSLEKQTVK
SHTETDEKQTESRTITPPAAPKPKREENPQKLAFMVSLGLVTHDHLEEIQSKRQERKR
RTTANPVYSGAVFEPERKKSAVTYLNSTMHPGTRKRGRPPKYNAVLGFGALTPTSPQS
SHPDSPENEKTETTFTFPAPVQPVSLPSPTSTDGDIHEDFCSVCRKSGQLLMCDTCSR
VYHLDCLDPPLKTIPKGMWICPRCQDQMLKKEEAIPWPGTLAIVHSYIAYKAAKEEEK
QKLLKWSSDLKQEREQLEQKVKQLSNSISKCMEMKNTILARQKEMHSSLEKVKQLIRL
IHGIDLSKPVDSEATVGAISNGPDCTPPANAATSTPAPSPSSQSCTANCNQGEETK"
BASE COUNT 857 a 782 c 632 g 560 t
ORIGIN
1 ctaccatctt aacacactaa tatctaaaaa gtgcgagagg cccagagcag cagcagaagc
61 agcagcagca gctccagctt cttccctccc tcctcctcct gcttctcctg ctcagagttc
121 ctgcctccag ctgccagggg ggacagccag ccagcagcag gaggggggct agagagctga
181 aggagagcca gtttccccaa aattgctgca gtgagaagag gagtttgtta ctttaaacag
241 aggctgaaga aactatagaa ttagcagaga aagtggagaa ggtagaggat ggagttgcag
301 actctacagg aggctcttaa agtggaaatt caggttcacc agaaactggt tgctcaaatg
361 aagcaggatc cacagaatgc tgacttaaag aaacagcttc atgaactcca agccaaaatc
421 acagctttga gtgagaaaca gaaaagagta gttgaacagc tacggaagaa cctgatagta
481 aagcaagaac aaccggacaa gttccaaata cagccattgc cacaatctga aaacaaacta
541 caaacagcac agcagcaacc actacagcaa ctacaacaac agcagcagta ccaccaccac
601 cacgcccagc agtcagctgc agcctctccc aacctgactg cttcacagaa gactgtaact
661 acagcttcta tgattaccac aaagacacta cctctcgtct tgaaagcagc aactgcgacc
721 atgcctgcct ctgtggtggg ccagagacct accattgcta tggtgaccgc catcaacagt
781 cagaaggctg tgctcagcac tgatgtgcag aacacaccag tcaacctcca gacgtctagt
841 aaggtcactg ggcctggggc agaggctgtc caaattgtgg caaaaaacac agtcactctg
901 gttcaggcaa cacctcctca gcccatcaaa gtaccacagt ttatcccccc tcctagactc
961 actccacgtc caaactttct tccacaggtt cgacccaagc ctgtggccca gaataacatt
1021 cctattgccc cagcaccacc tcccatgctc gcagctcctc agcttatcca gaggcccgtc
1081 atgctgacca agttcacccc cacaaccctt cccacatccc agaattccat ccaccccgtc
1141 cgtgtcgtca atgggcagac tgcaaccata gccaaaacgt tccccatggc ccagctcacc
1201 agcattgtga tagctactcc agggaccaga ctcgctggac ctcaaactgt acagcttagc
1261 aagccaagtc ttgaaaaaca gacagttaaa tctcacacag aaacagatga gaaacaaaca
1321 gagagccgca ccatcacccc acctgctgca cccaaaccaa aacgggagga gaaccctcag
1381 aaacttgcct tcatggtgtc tctagggttg gtaacacatg accatctaga agaaatccaa
1441 agcaagaggc aagagcgaaa aagaagaaca acagcaaatc cggtctacag tggagcagtc
1501 tttgagccag agcgtaagaa gagtgcagtg acatacctaa acagcacaat gcaccctggg
1561 acccggaaga gaggtcgtcc tccaaaatac aatgcagtgc tggggtttgg agcccttacc
1621 ccaacatccc cccaatccag tcatcctgac tcccctgaaa atgaaaagac agagaccaca
1681 ttcactttcc ctgcacctgt tcagcctgtg tccctgccca gccccacctc cacagacggt
1741 gatattcatg aggatttttg cagcgtttgc agaaaaagtg gccagttact gatgtgcgac
1801 acatgttccc gtgtatatca tttggactgc ttagaccccc ctctgaaaac aattcccaag
1861 ggcatgtgga tctgtcccag atgtcaggac cagatgctga agaaggaaga agcaattcca
1921 tggcctggaa ctttagcaat tgttcattcc tatattgcct acaaagcagc aaaagaagaa
1981 gagaaacaga agttacttaa atggagttca gatttaaaac aagaacgaga acaactagag
2041 caaaaggtga aacagctcag caattccata agtaaatgca tggaaatgaa gaacaccatc
2101 ctggcccggc agaaggagat gcacagctcc ctggagaagg taaaacagct gattcgcctc
2161 atccacggca tcgacctctc caaacctgta gactctgagg ccactgtggg ggccatctcc
2221 aatggcccgg actgcacccc ccctgccaat gccgccacct ccacgccggc cccttccccc
2281 tcctcccaga gctgcacagc gaactgtaac cagggggaag agactaaata acagagcccc
2341 tctaggagaa gccacgggat cccggcggca aggagaacag aacactgaag actctagaaa
2401 agcaaagccg gatttctgga aagtgcagaa ttcttttggt tctttggttc cagagagaga
2461 gaagatgctt gtgccaggtg gcaccagagt ttgccaattg atccttctta ttctgtgtgt
2521 acatgcaaag attggaccat gttacatgaa atagtgccag ctggaggttc tttgccagca
2581 ccatgccaag tgaaataata tatttactct ctctattata caccagtgtg tgcctgcagc
2641 agcctccaca gccacgatgg gtttgtttct gttttcttgg gtggggagca gggacgggcg
2701 gagggaggag agcaggtttc agatccttac ttgccgagcc gtttgtttag gtagagaaga
2761 caagtccaaa gagtgtgtgg gctttcctgt ttctaaactt tcgctactat aaaaccaaaa
2821 aaaaaaaaaa a
//