LOCUS BC015711 3081 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens splA/ryanodine receptor domain and SOCS box containing 1, mRNA (cDNA clone MGC:16798 IMAGE:3916157), complete cds. ACCESSION BC015711 VERSION BC015711.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3081) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3081) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (09-OCT-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 15 Row: k Column: 17 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 18141315. FEATURES Location/Qualifiers source 1..3081 /db_xref="H-InvDB:HIT000037267" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:16798 IMAGE:3916157" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_72" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3081 /gene="SPSB1" /gene_synonym="SSB-1" /gene_synonym="SSB1" /db_xref="GeneID:80176" /db_xref="HGNC:HGNC:30628" CDS 291..1112 /gene="SPSB1" /gene_synonym="SSB-1" /gene_synonym="SSB1" /codon_start=1 /product="splA/ryanodine receptor domain and SOCS box containing 1" /protein_id="AAH15711.1" /db_xref="GeneID:80176" /db_xref="HGNC:HGNC:30628" /translation="MGQKVTGGIKTVDMRDPTYRPLKQELQGLDYCKPTRLDLLLDMP PVSYDVQLLHSWNNNDRSLNVFVKEDDKLIFHRHPVAQSTDAIRGKVGYTRGLHVWQI TWAMRQRGTHAVVGVATADAPLHSVGYTTLVGNNHESWGWDLGRNRLYHDGKNQPSKT YPAFLEPDETFIVPDSFLVALDMDDGTLSFIVDGQYMGVAFRGLKGKKLYPVVSAVWG HCEIRMRYLNGLDPEPLPLMDLCRRSVRLALGRERLGEIHTLPLPASLKAYLLYQ" BASE COUNT 664 a 896 c 833 g 688 t ORIGIN 1 ctcgcagcag gaaccaggct ccaggcgccg gcgccggggc cgcggggagg aggcgacttc 61 gctccctgcg gcgggcgcgg cccgggcgcc cgagcctcct cggccttgga gagcagcggc 121 ggcggcggca ccccgggcgc ggcaatactg aacactgcgc agcttgcaga ggtctcctgg 181 cagccctcat taggaattct gtctggcccc gatcagaata ctggagacga gaccacgaga 241 ttgatgagtt tgccttggga gtcggtaaga aggtgaagcc aggggcgaac atgggtcaga 301 aggtcactgg agggatcaag actgtggaca tgagggaccc cacgtacagg cccctgaagc 361 aggagctcca gggtctggat tactgcaagc ccacccggct ggatctgcta ctggacatgc 421 cccctgtgtc ctatgatgtc cagctgctgc attcatggaa caacaacgac cgatcgctca 481 atgtctttgt gaaggaggac gacaagctca tctttcaccg gcatccggtg gcccagagca 541 cggacgctat caggggcaaa gtcgggtata cccgtgggct gcacgtgtgg cagatcacgt 601 gggccatgag acagcggggc acacacgccg tggtgggggt ggcgacggca gacgcccccc 661 tgcactctgt cgggtacaca accctcgtgg ggaataacca cgagtcctgg ggctgggact 721 tggggcgcaa ccggctctac cacgatggca agaaccagcc aagcaaaaca tacccagcct 781 ttctggaacc agatgagaca ttcattgtcc ctgactcctt cctggtagcc ctggacatgg 841 acgacgggac tctgagcttc attgtggatg gacagtacat gggagtggct tttcggggac 901 tcaagggcaa aaaactgtat cctgtagtga gtgccgtctg gggccactgt gagatccgaa 961 tgcgctactt gaacggactc gatcccgagc cgctgccgct catggatttg tgccgtcgct 1021 cggtgcgcct ggccctgggg agggagcgcc tgggggagat ccacacgctg ccgctgccgg 1081 cttccctcaa ggcctacctc ctctaccagt gacgttcgcc atcataccgc cagcgcgaca 1141 gccacctggt gccaactcac tgagccgcct gccgctgggg ccgccgcacc ctgcaccttg 1201 gaccggcatc cgtagccatg gacagaggtc cctggtcttc cctcatcctc cgtggctgcc 1261 tccatgggac aaggaccgat tccaacacag gctcctcttt cccccttccc gacatcagca 1321 gaaggcagca tccctgcatg ccgtccgtat acaacccctc tttgaaaaaa gacacagaga 1381 ataaactcct acgaaagccc tacattgagc tccaatctgc tcggggtggg acgggtgctt 1441 cccacacctc tgggagaagg ctgcagccac ctgggggtcc cagggtggtg ggggtggcag 1501 gtggtaccac agctctgaga gcagatacca ggggtactaa gaggtgctta gacaagggct 1561 ggtgcccggc ccagggtgcc cagcggggcc atgccatggc agataaagct caggacgtca 1621 aaaactcacc atggacccca aggcagaaac caagaactgt ctgcaggcaa ataagcaccc 1681 agcacccatc ctggctgccg gtgccccgta ccctgtattt attcttttaa caataacaaa 1741 agccatttat ttattccatc tagaaaggaa accctgtttc agtcccctct ctctggctgt 1801 tctgttactt tccttccacc tgtgccctcc ctgggatatg tatgcctcgc ccgccctccc 1861 tgggcacatg tgcacacgtg cccaggcaca agtatgtctc tgggtccctt gccctgcagt 1921 ttccaggggg ctctgctcca agttccctag cgggcccctc agggagaaat agcctcacgt 1981 gcaatctggg tgtcttcggg ggcccgtctg gaagggctgc agcaattccc ctgtgtctcc 2041 aggtaaccag ctaactcttg ggctcaggca cccttgcaca gggttgcatt tctttagtct 2101 tctgtgggtc ttttgatgtg ggtttgattt tgcttttgct tttctagctg agatttccca 2161 agtgcatcct cagaagctct gggtgtgcca gaggaccccc agaactaaga agggagggcg 2221 agtgggtctc cattccccga gaagccaggg gcagggtggg atggggaaga ccaggagcag 2281 agtcgagcct cacagaagcc agcgcgggtc tctgctcagc accccagccg gggctctgga 2341 cccagggtaa cagccccagt tcatcccaac ccctctcaga gcctcaagag gggtagctcg 2401 gctgccggaa gagaggggtg ccctatccct ggcaacccct ccacgtagcg taccccagca 2461 cctgccaccg cctttgccat ttctttgagc ttgaagttaa ctctcttaga gtctaacttt 2521 ggttcatttc tgcacaggta caatagatga ctttatttgt ttaaaatgtt taatatatat 2581 acatacatat atatatattt gtctgtaaga attatgtttt aaacagctgc tgtagagtac 2641 ctttttttaa gtaaatctta cagtggagta tattttttaa agcacaaaat tggtgccaag 2701 actgggtgag aaatgtacat taccccctta ttattttgac ggtttttttt ttcggggcag 2761 gggaccttac ctgtaagact tttaaagatt ttcctccctc ctgtttcagg tgggtcacat 2821 tctgatgaat gtttcccttg tacagatccc agcttatggc cttgacccag ccgtcctcac 2881 agatgccggg tgaccctcta gctctctctg catctcccac cccccgacac cctgggaccc 2941 tcgaccccac ccttctttcc taccagccca gagccttgtg gcttgtacag ttttgaaact 3001 cccgttctat tttatgatgg ttgataatag tcagtaacct aataaaggaa cgtttgttaa 3061 aatatcaaaa aaaaaaaaaa a //