LOCUS BC015711 3081 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens splA/ryanodine receptor domain and SOCS box containing
1, mRNA (cDNA clone MGC:16798 IMAGE:3916157), complete cds.
ACCESSION BC015711
VERSION BC015711.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3081)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3081)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 15 Row: k Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 18141315.
FEATURES Location/Qualifiers
source 1..3081
/db_xref="H-InvDB:HIT000037267"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:16798 IMAGE:3916157"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3081
/gene="SPSB1"
/gene_synonym="SSB-1"
/gene_synonym="SSB1"
/db_xref="GeneID:80176"
/db_xref="HGNC:HGNC:30628"
CDS 291..1112
/gene="SPSB1"
/gene_synonym="SSB-1"
/gene_synonym="SSB1"
/codon_start=1
/product="splA/ryanodine receptor domain and SOCS box
containing 1"
/protein_id="AAH15711.1"
/db_xref="GeneID:80176"
/db_xref="HGNC:HGNC:30628"
/translation="MGQKVTGGIKTVDMRDPTYRPLKQELQGLDYCKPTRLDLLLDMP
PVSYDVQLLHSWNNNDRSLNVFVKEDDKLIFHRHPVAQSTDAIRGKVGYTRGLHVWQI
TWAMRQRGTHAVVGVATADAPLHSVGYTTLVGNNHESWGWDLGRNRLYHDGKNQPSKT
YPAFLEPDETFIVPDSFLVALDMDDGTLSFIVDGQYMGVAFRGLKGKKLYPVVSAVWG
HCEIRMRYLNGLDPEPLPLMDLCRRSVRLALGRERLGEIHTLPLPASLKAYLLYQ"
BASE COUNT 664 a 896 c 833 g 688 t
ORIGIN
1 ctcgcagcag gaaccaggct ccaggcgccg gcgccggggc cgcggggagg aggcgacttc
61 gctccctgcg gcgggcgcgg cccgggcgcc cgagcctcct cggccttgga gagcagcggc
121 ggcggcggca ccccgggcgc ggcaatactg aacactgcgc agcttgcaga ggtctcctgg
181 cagccctcat taggaattct gtctggcccc gatcagaata ctggagacga gaccacgaga
241 ttgatgagtt tgccttggga gtcggtaaga aggtgaagcc aggggcgaac atgggtcaga
301 aggtcactgg agggatcaag actgtggaca tgagggaccc cacgtacagg cccctgaagc
361 aggagctcca gggtctggat tactgcaagc ccacccggct ggatctgcta ctggacatgc
421 cccctgtgtc ctatgatgtc cagctgctgc attcatggaa caacaacgac cgatcgctca
481 atgtctttgt gaaggaggac gacaagctca tctttcaccg gcatccggtg gcccagagca
541 cggacgctat caggggcaaa gtcgggtata cccgtgggct gcacgtgtgg cagatcacgt
601 gggccatgag acagcggggc acacacgccg tggtgggggt ggcgacggca gacgcccccc
661 tgcactctgt cgggtacaca accctcgtgg ggaataacca cgagtcctgg ggctgggact
721 tggggcgcaa ccggctctac cacgatggca agaaccagcc aagcaaaaca tacccagcct
781 ttctggaacc agatgagaca ttcattgtcc ctgactcctt cctggtagcc ctggacatgg
841 acgacgggac tctgagcttc attgtggatg gacagtacat gggagtggct tttcggggac
901 tcaagggcaa aaaactgtat cctgtagtga gtgccgtctg gggccactgt gagatccgaa
961 tgcgctactt gaacggactc gatcccgagc cgctgccgct catggatttg tgccgtcgct
1021 cggtgcgcct ggccctgggg agggagcgcc tgggggagat ccacacgctg ccgctgccgg
1081 cttccctcaa ggcctacctc ctctaccagt gacgttcgcc atcataccgc cagcgcgaca
1141 gccacctggt gccaactcac tgagccgcct gccgctgggg ccgccgcacc ctgcaccttg
1201 gaccggcatc cgtagccatg gacagaggtc cctggtcttc cctcatcctc cgtggctgcc
1261 tccatgggac aaggaccgat tccaacacag gctcctcttt cccccttccc gacatcagca
1321 gaaggcagca tccctgcatg ccgtccgtat acaacccctc tttgaaaaaa gacacagaga
1381 ataaactcct acgaaagccc tacattgagc tccaatctgc tcggggtggg acgggtgctt
1441 cccacacctc tgggagaagg ctgcagccac ctgggggtcc cagggtggtg ggggtggcag
1501 gtggtaccac agctctgaga gcagatacca ggggtactaa gaggtgctta gacaagggct
1561 ggtgcccggc ccagggtgcc cagcggggcc atgccatggc agataaagct caggacgtca
1621 aaaactcacc atggacccca aggcagaaac caagaactgt ctgcaggcaa ataagcaccc
1681 agcacccatc ctggctgccg gtgccccgta ccctgtattt attcttttaa caataacaaa
1741 agccatttat ttattccatc tagaaaggaa accctgtttc agtcccctct ctctggctgt
1801 tctgttactt tccttccacc tgtgccctcc ctgggatatg tatgcctcgc ccgccctccc
1861 tgggcacatg tgcacacgtg cccaggcaca agtatgtctc tgggtccctt gccctgcagt
1921 ttccaggggg ctctgctcca agttccctag cgggcccctc agggagaaat agcctcacgt
1981 gcaatctggg tgtcttcggg ggcccgtctg gaagggctgc agcaattccc ctgtgtctcc
2041 aggtaaccag ctaactcttg ggctcaggca cccttgcaca gggttgcatt tctttagtct
2101 tctgtgggtc ttttgatgtg ggtttgattt tgcttttgct tttctagctg agatttccca
2161 agtgcatcct cagaagctct gggtgtgcca gaggaccccc agaactaaga agggagggcg
2221 agtgggtctc cattccccga gaagccaggg gcagggtggg atggggaaga ccaggagcag
2281 agtcgagcct cacagaagcc agcgcgggtc tctgctcagc accccagccg gggctctgga
2341 cccagggtaa cagccccagt tcatcccaac ccctctcaga gcctcaagag gggtagctcg
2401 gctgccggaa gagaggggtg ccctatccct ggcaacccct ccacgtagcg taccccagca
2461 cctgccaccg cctttgccat ttctttgagc ttgaagttaa ctctcttaga gtctaacttt
2521 ggttcatttc tgcacaggta caatagatga ctttatttgt ttaaaatgtt taatatatat
2581 acatacatat atatatattt gtctgtaaga attatgtttt aaacagctgc tgtagagtac
2641 ctttttttaa gtaaatctta cagtggagta tattttttaa agcacaaaat tggtgccaag
2701 actgggtgag aaatgtacat taccccctta ttattttgac ggtttttttt ttcggggcag
2761 gggaccttac ctgtaagact tttaaagatt ttcctccctc ctgtttcagg tgggtcacat
2821 tctgatgaat gtttcccttg tacagatccc agcttatggc cttgacccag ccgtcctcac
2881 agatgccggg tgaccctcta gctctctctg catctcccac cccccgacac cctgggaccc
2941 tcgaccccac ccttctttcc taccagccca gagccttgtg gcttgtacag ttttgaaact
3001 cccgttctat tttatgatgg ttgataatag tcagtaacct aataaaggaa cgtttgttaa
3061 aatatcaaaa aaaaaaaaaa a
//