LOCUS BC015659 2651 bp mRNA linear HUM 23-DEC-2003
DEFINITION Homo sapiens stromal interaction molecule 2, mRNA (cDNA clone
IMAGE:4843971), partial cds.
ACCESSION BC015659
VERSION BC015659.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2651)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2651)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (04-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC015659.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 33 Row: o Column: 16.
FEATURES Location/Qualifiers
source 1..2651
/db_xref="H-InvDB:HIT000088763"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4843971"
/tissue_type="Eye, normal, pigmented retinal epithelium"
/clone_lib="NIH_MGC_43"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2651
/gene="STIM2"
/db_xref="GeneID:57620"
CDS <1..1668
/gene="STIM2"
/codon_start=1
/product="STIM2 protein"
/protein_id="AAH15659.2"
/db_xref="GeneID:57620"
/translation="QKLQLKALDVVLFGPLTRPPHNWMKDFILTVSIVIGVGGCWFAY
TQNKTSKEHVAKMMKDLESLQTAEQSLMDLQERLEKAQEENRNVAVEKQNLERKMMDE
INYAKEEACRLRELREGAECELSRRQYAEQELEQVRMALKKAEKEFELRSSWSVPDAL
QKWLQLTHEVEVQYYNIKRQNAEMQLAIAKDEAEKIKKKRSTVFGTLHVAHSSSLDEV
DHKILEAKKALSELTTCLRERLFRWQQIEKICGFQIAHNSGLPSLTSSLYSDHSWVVM
PRVSIPPYPIAGGVDDLDEDTPPIVSQFPGTMAKPPGSLARSSSLCRSRRSIVPSSPQ
PQRAQLAPHAPHPSHPRHPHHPQHTPHSLPSPDPDILSVSSCPALYRNEEEEEAIYFS
AEKQWEVPDTASECDSLNSSIGRKQSPPLSLEIYQTLSPRKISRDEVSLEDSSRGDSP
VTVDVSWGSPDCVGLTETKSMIFSPASKVYNGILEKSCSMNQLSSGIPVPKPRHTSCS
SAGNDSKPVQEAPSVARISSIPHDLCHNGEKSKKPSKIKSLFKKKSK"
misc_feature 142..555
/gene="STIM2"
/note="ERM; Region: Ezrin/radixin/moesin family. This
family of proteins contain a band 4.1 domain (pfam00373),
at their amino terminus. This family represents the rest
of these proteins"
/db_xref="CDD:pfam00769"
BASE COUNT 826 a 559 c 565 g 701 t
ORIGIN
1 caaaaacttc agctcaaggc attggatgtg gttttgtttg gacctctaac acgcccacct
61 cataactgga tgaaagattt tatcctcaca gtttctatag taattggtgt tggaggctgc
121 tggtttgctt atacgcagaa taagacatca aaagaacatg ttgcaaaaat gatgaaagat
181 ttagagagct tacaaactgc agagcaaagt ctaatggact tacaagagag gcttgaaaag
241 gcacaggaag aaaacagaaa tgttgctgta gaaaagcaaa atttagagcg caaaatgatg
301 gatgaaatca attatgcaaa ggaggaggct tgtcggctga gagagctaag ggagggagct
361 gaatgtgaat tgagtagacg tcagtatgca gaacaggaat tggaacaggt tcgcatggct
421 ctgaaaaagg ccgaaaaaga atttgaactg agaagcagtt ggtctgttcc agatgcactt
481 cagaaatggc ttcagttaac acatgaagta gaagtgcaat actacaatat taaaagacaa
541 aacgctgaaa tgcagctagc tattgctaaa gatgaggcag aaaaaattaa aaagaagaga
601 agcacagtct ttgggactct gcacgttgca cacagctcct ccctagatga ggtagaccac
661 aaaattctgg aagcaaagaa agctctctct gagttgacaa cttgtttacg agaacgactt
721 tttcgctggc aacaaattga gaagatctgt ggctttcaga tagcccataa ctcaggactc
781 cccagcctga cctcttccct ttattctgat cacagctggg tggtgatgcc cagagtctcc
841 attccaccct atccaattgc tggaggagtt gatgacttag atgaagacac acccccaata
901 gtgtcacaat ttcccgggac catggctaaa cctcctggat cattagccag aagcagcagc
961 ctgtgccgtt cacgccgcag cattgtgccg tcctcgcctc agcctcagcg agctcagctt
1021 gctccacacg ccccccaccc gtcacaccct cggcaccctc accacccgca acacacacca
1081 cactccttgc cttcccctga tccagatatc ctctcagtgt caagttgccc tgcgctttat
1141 cgaaatgaag aggaggaaga ggccatttac ttctctgctg aaaagcaatg ggaagtgcca
1201 gacacagctt cagaatgtga ctccttaaat tcttccattg gaaggaaaca gtctcctcct
1261 ttaagcctcg agatatacca aacattatct ccgcgaaaga tatcaagaga tgaggtgtcc
1321 ctagaggatt cctcccgagg ggattcgcct gtaactgtgg atgtgtcttg gggttctccc
1381 gactgtgtag gtctgacaga aactaagagt atgatcttca gtcctgcaag caaagtgtac
1441 aatggcattt tggagaaatc ctgtagcatg aaccagcttt ccagtggcat cccggtgcct
1501 aaacctcgcc acacatcatg ttcctcagct ggcaacgaca gtaaaccagt tcaggaagcc
1561 ccaagtgttg ccagaataag cagcatccca catgaccttt gtcataatgg agagaaaagc
1621 aaaaagccat caaaaatcaa aagccttttt aagaagaaat ctaagtgaac tggctgactt
1681 gatggaatca tgttcaagtg gcatctgtaa actattatcc cccaccctcc actccccacc
1741 ttttttttgg tttaatttta ggaatgtaac tccattgggg ctttccaggc cggatgccat
1801 agtggaacat ccagaagggc aactgtctac tgtctgctta tttaagtgac tatatataat
1861 caattcatca agccagttat tactgaaaaa tcattgaaat gagacagttt acagtcattt
1921 ctgcctattt atttctgctt tgttctcagt gatgtatatg caacattttg ttgaaagcca
1981 cgatggactt acaagcttta atggactcgt aagccagcat gggcttgcaa aaatttcttg
2041 tttaccagag catcttctta tctttccaca gagctattta catcctggac tatataactt
2101 aaaagaagta aaacgtaatt gcactactgt tttccagact ggaaaaaaaa aaaaatctct
2161 gcaagtgaaa ctgtatagag tttataaaat gactatggat aggggactgt tttcactttt
2221 agatcaaaat gggtttttaa gtagaaccta gggtttctaa ttgacttgat ttctggaaat
2281 gaaaacccgc gcttttatta tgggaagctt cttgaactgc atttactatt gtgaagtttc
2341 aagtcccgct gtaaagatca tgttgttttg ttttccccag ggctttcact gtgatttact
2401 gcattgcagg ctgtatgata aaacacacat aatttaaaga gagaaggctc ttgattcctt
2461 atgcaagtgg aagagttgaa acttgattga aggacttaaa acattcacaa ccttaagccg
2521 aggtgggggg atatggggat tcaggcaatt gtttacacac tttgaataac tgcaaaggat
2581 ttacggtttg tgaaaaatgt gtactgtgga aaagataata aattgaagac attaaaaaaa
2641 aaaaaaaaaa a
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