LOCUS BC015631 2984 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens solute carrier family 5 (sodium-dependent vitamin transporter), member 6, mRNA (cDNA clone MGC:23042 IMAGE:3628126), complete cds. ACCESSION BC015631 VERSION BC015631.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2984) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2984) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (04-OCT-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC015631.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 33 Row: a Column: 10 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 10863878. FEATURES Location/Qualifiers source 1..2984 /db_xref="H-InvDB:HIT000037228" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:23042 IMAGE:3628126" /tissue_type="Brain, neuroblastoma" /clone_lib="NIH_MGC_19" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2984 /gene="SLC5A6" /gene_synonym="SMVT" /db_xref="GeneID:8884" /db_xref="HGNC:HGNC:11041" /db_xref="MIM:604024" CDS 209..2116 /gene="SLC5A6" /gene_synonym="SMVT" /codon_start=1 /product="solute carrier family 5 (sodium-dependent vitamin transporter), member 6" /protein_id="AAH15631.1" /db_xref="GeneID:8884" /db_xref="HGNC:HGNC:11041" /db_xref="MIM:604024" /translation="MSVGVSTSAPLSPTSGTSVGMSTFSIMDYVVFVLLLVLSLAIGL YHACRGWGRHTVGELLMADRKMGCLPVALSLLATFQSAVAILGVPSEIYRFGTQYWFL GCCYFLGLLIPAHIFIPVFYRLHLTSAYEYLELRFNKTVRVCGTVTFIFQMVIYMGVV LYAPSLALNAVTGFDLWLSVLALGIVCTVYTALGGLKAVIWTDVFQTLVMFLGQLAVI IVGSAKVGGLGRVWAVASQHGRISGFELDPDPFVRHTFWTLAFGGVFMMLSLYGVNQA QVQRYLSSRTEKAAVLSCYAVFPFQQVSLCVGCLIGLVMFAYYQEYPMSIQQAQAAPD QFVLYFVMDLLKGLPGLPGLFIACLFSGSLSTISSAFNSLATVTMEDLIRPWFPEFSE ARAIMLSRGLAFGYGLLCLGMAYISSQMGPVLQAAISIFGMVGGPLLGLFCLGMFFPC ANPPGAVVGLLAGLVMAFWIGIGSIVTSMGSSMPPSPSNGSSFSLPTNLTVATVTTLM PLTTFSKPTGLQRFYSLSYLWYSAHNSTTVIVVGLIVSLLTGRMRGRSLNPATIYPVL PKLLSLLPLSCQKRLHCRSYGQDHLDTGLFPEKPRNGVLGDSRDKEAMALDGTAYQGS SSTCILQETSL" BASE COUNT 575 a 838 c 786 g 785 t ORIGIN 1 ggaaaaggga gcgatgttga tctcaggaag cacaaaggga ccttcctagc tctgactgaa 61 ccacggagct caccctggac agtatcactc cgtggaggaa gactgtgaga ctgtggctgg 121 aagccagatt gtagccacac atccgcccct gccctacccc agagccctgg agcagcaact 181 ggctgcagat cacagacaca gtgaggatat gagtgtaggg gtgagcacct cagcccctct 241 ttccccaacc tcgggcacaa gcgtgggcat gtctaccttc tccatcatgg actatgtggt 301 gttcgtcctg ctgctggttc tctctcttgc cattgggctc taccatgctt gtcgtggctg 361 gggccggcat actgttggtg agctgctgat ggcggaccgc aaaatgggct gccttccggt 421 ggcactgtcc ctgctggcca ccttccagtc agccgtggcc atcctgggtg tgccgtcaga 481 gatctaccga tttgggaccc aatattggtt cctgggctgc tgctactttc tggggctgct 541 gatacctgca cacatcttca tccccgtttt ctaccgcctg catctcacca gtgcctatga 601 gtacctggag cttcgattca ataaaactgt gcgagtgtgt ggaactgtga ccttcatctt 661 tcagatggtg atctacatgg gagttgtgct ctatgctccg tcattggctc tcaatgcagt 721 gactggcttt gatctgtggc tgtccgtgct ggccctgggc attgtctgta ccgtctatac 781 agctctgggt gggctgaagg ccgtcatctg gacagatgtg ttccagacac tggtcatgtt 841 cctcgggcag ctggcagtta tcatcgtggg gtcagccaag gtgggcggct tggggcgtgt 901 gtgggccgtg gcttcccagc acggccgcat ctctgggttt gagctggatc cagacccctt 961 tgtgcggcac accttctgga ccttggcctt cgggggtgtc ttcatgatgc tctccttata 1021 cggggtgaac caggctcagg tgcagcggta cctcagttcc cgcacggaga aggctgctgt 1081 gctctcctgt tatgcagtgt tccccttcca gcaggtgtcc ctctgcgtgg gctgcctcat 1141 tggcctggtc atgttcgcgt attaccagga gtatcccatg agcattcagc aggctcaggc 1201 agccccagac cagttcgtcc tgtactttgt gatggatctc ctgaagggcc tgccaggcct 1261 gccagggctc ttcattgcct gcctcttcag cggctctctc agcactatat cctctgcttt 1321 taattcattg gcaactgtta cgatggaaga cctgattcga ccttggttcc ctgagttctc 1381 tgaagcccgg gccatcatgc tttccagagg ccttgccttt ggctatgggc tgctttgtct 1441 aggaatggcc tatatttcct cccagatggg acctgtgctg caggcagcaa tcagcatctt 1501 tggcatggtt gggggaccgc tgctgggact cttctgcctt ggaatgttct ttccatgtgc 1561 taaccctcct ggtgctgttg tgggcctgtt ggctgggctc gtcatggcct tctggattgg 1621 catcgggagc atcgtgacca gcatgggctc cagcatgcca ccctctccct ctaatgggtc 1681 cagcttctcc ctgcccacca atctaaccgt tgccactgtg accacactga tgcccttgac 1741 taccttctcc aagcccacag ggctgcagcg gttctattcc ttgtcttact tatggtacag 1801 tgctcacaac tccaccacag tgattgtggt gggcctgatt gtcagtctac tcactgggag 1861 aatgcgaggc cggtccctga accctgcaac catttaccca gtgttgccaa agctcctgtc 1921 cctccttccg ttgtcctgtc agaagcggct ccactgcagg agctacggcc aggaccacct 1981 cgacactggc ctgtttcctg agaagccgag gaatggtgtg ctgggggaca gcagagacaa 2041 ggaggccatg gccctggatg gcacagccta tcaggggagc agctccacct gcatcctcca 2101 ggagacctcc ctgtgatgtt gactcaggac cccgcctctg tcctcactgt gccaggccat 2161 agccagaggc caccctgtag tacagggatg agtcttggtg tgttctgcag ggacaggcct 2221 ggatgatcta gctcatacca aaggaccttg ttctgagagg ttcttgcctg caggagaagc 2281 tgtcacatct caagcatgtg aggcaccgtt tttctcgtcg cttgccaatc tgttttttaa 2341 aggatcaggc tcgtagggag caggatcatg ccagaaatag ggatggaagt gcatcctctg 2401 ggaaaaagat aatggcttct gattcaacat agccatagtc ctttgaagta agtggctaga 2461 aacagcactc tggttataat tgccccaggg cctgattcag gactgactct ccaccataaa 2521 actggaagct gcttcccctg tagtccccat ttcagtacca gttctgccag ccacagtgag 2581 cccctattat tactttcaga ttgtctgtga cactcaagcc cctctcattt ttatctgtct 2641 acctccattc tgaagaggga ggttttggtg tccctggtcc tctgggaata gaagatccat 2701 ttgtctttgt gtagagcaag cacgttttcc acctcactgt ctccatcctc cacctttgag 2761 atggacactt aagagacggg gcaaatgtgg atccaagaaa ccagggccat gaccaggtcc 2821 actgtggagc agccatctat ttacctgact cctgagccag gctgccgtgg tgtcatttct 2881 gtcatccgtg ctctgtttcc ttttggagtt tcttctccac attatctttg ttcctgggga 2941 ataaaaacta ccattggacc tagaaaaaaa aaaaaaaaaa aaaa //