LOCUS BC015600 1822 bp mRNA linear HUM 23-DEC-2003
DEFINITION Homo sapiens sulfatase modifying factor 2, mRNA (cDNA clone
IMAGE:4653574), partial cds.
ACCESSION BC015600
VERSION BC015600.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1822)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1822)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (04-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC015600.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 33 Row: i Column: 7.
FEATURES Location/Qualifiers
source 1..1822
/db_xref="H-InvDB:HIT000037207"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4653574"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1822
/gene="SUMF2"
/gene_synonym="DKFZp66I1024"
/db_xref="GeneID:25870"
/db_xref="MIM:607940"
CDS <1..1005
/gene="SUMF2"
/gene_synonym="DKFZp66I1024"
/codon_start=1
/product="SUMF2 protein"
/protein_id="AAH15600.2"
/db_xref="GeneID:25870"
/db_xref="MIM:607940"
/translation="LPLLPLLSLLVGAWLKLGNGQATSMVQLQGGRFLMGTNSPDSRD
GEGPVREATVKPFAIDIFPVTNKDFRDFVREKKYRTEAEMFGWSFVFEDFVSDELRNK
ATQPMKSVLWWLPVEKAFWRQPAGPGSGIRERLEHPVLHVSWNDARAYCAWRGKRLPT
EEEWEFAARGGLKGQVYPWGNWFQPNRTNLWQGKFPKGDKAEDGFHGVSPVNAFPAQN
NYGWATLQIQPQTTSVSAVLQTQAGRQGSCKQPGGDKEKSLLGSLSFPGHVANSAIPS
SRASASGKNFPFPVSHPSVAGASHQGRRGLSLLCFGEGAQCVLTMAGGQVFLLEAKYY
"
misc_feature 61..663
/gene="SUMF2"
/gene_synonym="DKFZp66I1024"
/note="DUF323; Region: Domain of unknown function
(DUF323). This presumed domain is found in bacterial
proteins. In some cases these proteins also contain a
protein kinase domain. The function of this domain is
unknown"
/db_xref="CDD:pfam03781"
BASE COUNT 439 a 459 c 476 g 448 t
ORIGIN
1 ttaccgctgc tgcccctgct gtcgctcctg gtcggcgcgt ggctcaagct aggaaatgga
61 caggctacta gcatggtcca actgcagggt gggagattcc tgatgggaac aaattctcca
121 gacagcagag atggtgaagg gcctgtgcgg gaggcgacag tgaaaccctt tgccatcgac
181 atatttcctg tcaccaacaa agatttcagg gattttgtca gggagaaaaa gtatcggaca
241 gaagctgaga tgtttggatg gagctttgtc tttgaggact ttgtctctga tgagctgaga
301 aacaaagcca cccagccaat gaagtctgta ctctggtggc ttccagtgga aaaggcattt
361 tggaggcagc ctgcaggtcc tggctctggc atccgagaga gactggagca cccagtgtta
421 cacgtgagct ggaatgacgc ccgtgcctac tgtgcttggc ggggaaaacg actgcccacg
481 gaggaagagt gggagtttgc cgcccgaggg ggcttgaagg gtcaagttta cccatggggg
541 aactggttcc agccaaaccg caccaacctg tggcagggaa agttccccaa gggagacaaa
601 gctgaggatg gcttccatgg agtctcccca gtgaatgctt tccccgccca gaacaactac
661 ggatgggcaa cactccagat tcagcctcag acaacctcgg tttccgctgt gctgcagacg
721 caggccggcc gccaggggag ctgtaagcag ccgggtggtg acaaggagaa aagccttcta
781 gggtcactgt cattccctgg ccatgttgca aacagcgcaa ttccaagctc gagagcttca
841 gcctcaggaa agaacttccc cttccctgtc tcccatccct ctgtggcagg cgcctctcac
901 cagggcagga gaggactcag cctcctgtgt tttggagaag gggcccaatg tgtgttgacg
961 atggctgggg gccaggtgtt tctgttagag gccaagtatt attgacacag gattgcaaac
1021 acacaaacaa ttggaacaga gcactctgaa aggccatttt ttaagcattt taaaatctat
1081 tctctccccc tttctccctg gatgattcag gaagctgaca ttgtttcctc aaggcagaat
1141 tttcctggtt ctgttttctc agccagttgc tgtggaagga gaatgctttc tttgtggcct
1201 catctgtggt ttcgtgtccc tctgaaggaa actagtttcc actgtgtaac aggcagacat
1261 gtaactattt aaagcacagt tcagtcctaa aagggtctgg gagaaccaga tgatgtacta
1321 ggtgaagcat tgcattgtgg gaatcacaaa gcaaatagta ctccagaaag acaaatatca
1381 gaagcttcct attctttttt tttttttttt ttttttgaga cagggtcttt ctctgttgcc
1441 caggctagag tgcactggtg atcacggctc actctagcct tgaattcctg ggcccaagca
1501 attctcccac ctcagcctcc tgagtagctg ggactacaag tgtgcaccac catgcctggc
1561 taattttttg aatttttgta gtgatgggat ctcgctctgt tgcccagggt ggtctcgaac
1621 tcctggcctc aagcgatcct cccacctcga cctcccaaag tgctgggatt acaggtgtga
1681 gccacctcgc ctgggccccc ttctccatat gcctccaaaa acatgtccct ggagagtagc
1741 ctgctcccac actgtcactg gatgtcatgg ggccaataaa atctcctgca attgtgtatc
1801 tcaaaaaaaa aaaaaaaaaa aa
//